Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ABA1_RS17135 | Genome accession | NZ_CP010781 |
| Coordinates | 3583090..3583572 (-) | Length | 160 a.a. |
| NCBI ID | WP_001046489.1 | Uniprot ID | A0A0J0ZLV7 |
| Organism | Acinetobacter baumannii strain A1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3578090..3588572
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABA1_RS17100 (ABA1_03432) | - | 3578201..3579232 (+) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
| ABA1_RS17105 (ABA1_03433) | - | 3579347..3580288 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| ABA1_RS17110 (ABA1_03434) | rplS | 3580340..3580708 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABA1_RS17115 (ABA1_03435) | trmD | 3580916..3581656 (-) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABA1_RS17120 (ABA1_03436) | rimM | 3581702..3582250 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABA1_RS17125 (ABA1_03437) | rpsP | 3582270..3582521 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABA1_RS17130 (ABA1_03438) | pilE | 3582668..3583093 (-) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| ABA1_RS17135 (ABA1_03439) | pilY2 | 3583090..3583572 (-) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| ABA1_RS17140 (ABA1_03440) | pilY1 | 3583583..3587437 (-) | 3855 | WP_000768943.1 | vWA domain-containing protein | Machinery gene |
| ABA1_RS17145 (ABA1_03441) | pilX | 3587449..3588267 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17657.94 Da Isoelectric Point: 8.4737
>NTDB_id=139744 ABA1_RS17135 WP_001046489.1 3583090..3583572(-) (pilY2) [Acinetobacter baumannii strain A1]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=139744 ABA1_RS17135 WP_001046489.1 3583090..3583572(-) (pilY2) [Acinetobacter baumannii strain A1]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
96.25 |
100 |
0.963 |
| comE | Acinetobacter baylyi ADP1 |
41.86 |
100 |
0.45 |