Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ABA1_RS17130 | Genome accession | NZ_CP010781 |
| Coordinates | 3582668..3583093 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788336.1 | Uniprot ID | A0A0J0ZME6 |
| Organism | Acinetobacter baumannii strain A1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3577668..3588093
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABA1_RS17100 (ABA1_03432) | - | 3578201..3579232 (+) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
| ABA1_RS17105 (ABA1_03433) | - | 3579347..3580288 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| ABA1_RS17110 (ABA1_03434) | rplS | 3580340..3580708 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABA1_RS17115 (ABA1_03435) | trmD | 3580916..3581656 (-) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABA1_RS17120 (ABA1_03436) | rimM | 3581702..3582250 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABA1_RS17125 (ABA1_03437) | rpsP | 3582270..3582521 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABA1_RS17130 (ABA1_03438) | pilE | 3582668..3583093 (-) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| ABA1_RS17135 (ABA1_03439) | pilY2 | 3583090..3583572 (-) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| ABA1_RS17140 (ABA1_03440) | pilY1 | 3583583..3587437 (-) | 3855 | WP_000768943.1 | vWA domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15175.41 Da Isoelectric Point: 7.8144
>NTDB_id=139743 ABA1_RS17130 WP_000788336.1 3582668..3583093(-) (pilE) [Acinetobacter baumannii strain A1]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=139743 ABA1_RS17130 WP_000788336.1 3582668..3583093(-) (pilE) [Acinetobacter baumannii strain A1]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
49.286 |
99.291 |
0.489 |