Detailed information
Bioinformatically predicted
Overview
| Name | ctsX | Type | Machinery gene |
| Locus tag | RC34_RS08225 | Genome accession | NZ_CP010500 |
| Coordinates | 1556806..1557393 (-) | Length | 195 a.a. |
| NCBI ID | WP_002932306.1 | Uniprot ID | A0A5T1D196 |
| Organism | Campylobacter jejuni strain CJ677CC528 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1551806..1562393
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC34_RS08205 (RC34_08170) | - | 1552554..1553318 (+) | 765 | WP_002932297.1 | TIGR02757 family protein | - |
| RC34_RS08210 (RC34_08175) | - | 1553321..1554085 (+) | 765 | WP_002932298.1 | TSUP family transporter | - |
| RC34_RS08215 (RC34_08180) | ctsF | 1554082..1555260 (-) | 1179 | WP_002932300.1 | type II secretion system F family protein | Machinery gene |
| RC34_RS08220 (RC34_08185) | ctsE | 1555257..1556816 (-) | 1560 | WP_032598692.1 | GspE/PulE family protein | Machinery gene |
| RC34_RS08225 (RC34_08190) | ctsX | 1556806..1557393 (-) | 588 | WP_002932306.1 | hypothetical protein | Machinery gene |
| RC34_RS08230 (RC34_08195) | ctsP | 1557397..1558005 (-) | 609 | WP_002932308.1 | ATP-binding protein | Machinery gene |
| RC34_RS08235 (RC34_08200) | mshL | 1557998..1559410 (-) | 1413 | Protein_1610 | pilus (MSHA type) biogenesis protein MshL | - |
| RC34_RS08240 (RC34_08205) | ctsR | 1559388..1559699 (-) | 312 | WP_002932309.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 23439.52 Da Isoelectric Point: 9.8409
>NTDB_id=138558 RC34_RS08225 WP_002932306.1 1556806..1557393(-) (ctsX) [Campylobacter jejuni strain CJ677CC528]
MQERIKELELRYKYFLLKKYLKYLFLIVLILVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKIFQAQILQEKNKISRE
KLYKELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK
MQERIKELELRYKYFLLKKYLKYLFLIVLILVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKIFQAQILQEKNKISRE
KLYKELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK
Nucleotide
Download Length: 588 bp
>NTDB_id=138558 RC34_RS08225 WP_002932306.1 1556806..1557393(-) (ctsX) [Campylobacter jejuni strain CJ677CC528]
ATGCAAGAAAGAATTAAAGAACTTGAGCTTAGGTATAAATATTTTTTACTTAAAAAATATTTAAAATATTTATTTTTAAT
TGTTTTAATCTTAGTGATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAAG
CTATTGAACATAAAAAGCATTTAGAGCAAAAGATTTTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGCGGTGCAGGAAAATACACATATTAGTAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCTTTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGTGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG
ATGCAAGAAAGAATTAAAGAACTTGAGCTTAGGTATAAATATTTTTTACTTAAAAAATATTTAAAATATTTATTTTTAAT
TGTTTTAATCTTAGTGATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAAG
CTATTGAACATAAAAAGCATTTAGAGCAAAAGATTTTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGCGGTGCAGGAAAATACACATATTAGTAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCTTTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGTGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsX | Campylobacter jejuni subsp. jejuni 81-176 |
97.949 |
100 |
0.979 |