Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | ACT75_RS09480 | Genome accession | NZ_CP012959 |
| Coordinates | 1932629..1933642 (+) | Length | 337 a.a. |
| NCBI ID | WP_005545577.1 | Uniprot ID | A0A142G245 |
| Organism | Aggregatibacter actinomycetemcomitans strain 624 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1927629..1938642
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACT75_RS09445 (ACT75_09435) | - | 1927644..1928018 (-) | 375 | WP_005594724.1 | transposase | - |
| ACT75_RS09450 (ACT75_09440) | - | 1928292..1929560 (+) | 1269 | WP_005542307.1 | NRAMP family divalent metal transporter | - |
| ACT75_RS09455 (ACT75_09445) | nudB | 1929666..1930112 (+) | 447 | WP_005595346.1 | dihydroneopterin triphosphate diphosphatase | - |
| ACT75_RS09460 (ACT75_09450) | - | 1930146..1930886 (+) | 741 | WP_005542303.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| ACT75_RS09465 (ACT75_09455) | - | 1930898..1931308 (+) | 411 | WP_005542301.1 | hypothetical protein | - |
| ACT75_RS09470 (ACT75_09460) | ruvC | 1931364..1931936 (+) | 573 | WP_005542300.1 | crossover junction endodeoxyribonuclease RuvC | - |
| ACT75_RS09475 (ACT75_09465) | ruvA | 1932000..1932614 (+) | 615 | WP_005542299.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| ACT75_RS09480 (ACT75_09470) | ruvB | 1932629..1933642 (+) | 1014 | WP_005545577.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| ACT75_RS09485 (ACT75_09475) | - | 1933696..1934007 (-) | 312 | WP_005542297.1 | DUF5339 domain-containing protein | - |
| ACT75_RS09490 (ACT75_09480) | - | 1934459..1936024 (+) | 1566 | WP_005549162.1 | cytochrome ubiquinol oxidase subunit I | - |
| ACT75_RS09495 (ACT75_09485) | cydB | 1936039..1937175 (+) | 1137 | WP_005542295.1 | cytochrome d ubiquinol oxidase subunit II | - |
| ACT75_RS12140 | - | 1937187..1937285 (+) | 99 | WP_019518193.1 | cytochrome bd oxidase small subunit, CydX/CbdX family | - |
| ACT75_RS09500 (ACT75_09490) | ybgE | 1937290..1937577 (+) | 288 | WP_005542294.1 | cyd operon protein YbgE | - |
| ACT75_RS09505 (ACT75_09495) | ybgC | 1937693..1938097 (+) | 405 | WP_005542293.1 | tol-pal system-associated acyl-CoA thioesterase | - |
Sequence
Protein
Download Length: 337 a.a. Molecular weight: 37378.90 Da Isoelectric Point: 4.7954
>NTDB_id=137760 ACT75_RS09480 WP_005545577.1 1932629..1933642(+) (ruvB) [Aggregatibacter actinomycetemcomitans strain 624]
MIEADRIISATAKLDEDVIDRAIRPKLLADYVGQPQVCEQMEIFIKAAKLRQDALDHLLIFGPPGLGKTTLANIVANEMG
VNIRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGA
TTRAGSLTSPLRDRFGIVQRLEFYSVSDLTSIVSRSAVCLQLKINDTAAYEIARRSRGTPRIANRLLRRVRDYADVRNNG
MISEEIAKAALSMLDIDDAGFDYLDRKLLTAVLERFDGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGFLQRTSRGRIA
TLTTYRHFGIEKITRED
MIEADRIISATAKLDEDVIDRAIRPKLLADYVGQPQVCEQMEIFIKAAKLRQDALDHLLIFGPPGLGKTTLANIVANEMG
VNIRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGA
TTRAGSLTSPLRDRFGIVQRLEFYSVSDLTSIVSRSAVCLQLKINDTAAYEIARRSRGTPRIANRLLRRVRDYADVRNNG
MISEEIAKAALSMLDIDDAGFDYLDRKLLTAVLERFDGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGFLQRTSRGRIA
TLTTYRHFGIEKITRED
Nucleotide
Download Length: 1014 bp
>NTDB_id=137760 ACT75_RS09480 WP_005545577.1 1932629..1933642(+) (ruvB) [Aggregatibacter actinomycetemcomitans strain 624]
ATGATTGAAGCAGACAGAATTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATT
GCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATG
CGTTGGATCATTTGCTGATTTTTGGCCCGCCAGGCTTAGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGC
GTAAATATTCGCACTACGTCAGGACCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTTGAACCCCA
TGATGTATTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATC
AGCTTGATATTATGATTGGCGAAGGGCCGGCAGCGCGTTCCATTAAATTGGATTTGCCGCCTTTTACGCTTATCGGTGCA
ACCACCCGTGCGGGCTCTTTAACCTCTCCGTTGCGCGATCGTTTTGGTATTGTGCAGCGTTTGGAATTTTATTCCGTGTC
GGATTTAACTTCTATTGTGTCCAGAAGTGCGGTCTGTTTACAGCTTAAAATTAACGATACGGCAGCTTATGAAATCGCCC
GCCGTTCTCGCGGCACGCCACGGATTGCCAATCGGTTATTACGTCGGGTGCGTGATTATGCTGATGTGCGTAACAATGGC
ATGATTAGTGAAGAGATTGCTAAAGCAGCGCTATCCATGCTGGATATTGATGATGCGGGGTTTGACTACTTAGACAGAAA
ATTGCTTACGGCAGTTTTGGAGCGCTTTGATGGTGGTCCGGTCGGTTTGGATAATTTGGCGGCGGCAATTGGGGAAGAGC
GGGATACCATTGAAGACGTATTGGAACCATATTTAATTCAACAGGGTTTTTTACAGCGAACCTCAAGGGGGCGAATTGCT
ACACTCACCACATATCGCCATTTCGGTATTGAGAAAATTACTCGCGAAGATTAA
ATGATTGAAGCAGACAGAATTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATT
GCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATG
CGTTGGATCATTTGCTGATTTTTGGCCCGCCAGGCTTAGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGC
GTAAATATTCGCACTACGTCAGGACCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTTGAACCCCA
TGATGTATTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATC
AGCTTGATATTATGATTGGCGAAGGGCCGGCAGCGCGTTCCATTAAATTGGATTTGCCGCCTTTTACGCTTATCGGTGCA
ACCACCCGTGCGGGCTCTTTAACCTCTCCGTTGCGCGATCGTTTTGGTATTGTGCAGCGTTTGGAATTTTATTCCGTGTC
GGATTTAACTTCTATTGTGTCCAGAAGTGCGGTCTGTTTACAGCTTAAAATTAACGATACGGCAGCTTATGAAATCGCCC
GCCGTTCTCGCGGCACGCCACGGATTGCCAATCGGTTATTACGTCGGGTGCGTGATTATGCTGATGTGCGTAACAATGGC
ATGATTAGTGAAGAGATTGCTAAAGCAGCGCTATCCATGCTGGATATTGATGATGCGGGGTTTGACTACTTAGACAGAAA
ATTGCTTACGGCAGTTTTGGAGCGCTTTGATGGTGGTCCGGTCGGTTTGGATAATTTGGCGGCGGCAATTGGGGAAGAGC
GGGATACCATTGAAGACGTATTGGAACCATATTTAATTCAACAGGGTTTTTTACAGCGAACCTCAAGGGGGCGAATTGCT
ACACTCACCACATATCGCCATTTCGGTATTGAGAAAATTACTCGCGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
61.774 |
97.033 |
0.599 |
| ruvB | Streptococcus pneumoniae TIGR4 |
58.282 |
96.736 |
0.564 |
| ruvB | Streptococcus pneumoniae R6 |
58.282 |
96.736 |
0.564 |
| ruvB | Streptococcus pneumoniae D39 |
58.282 |
96.736 |
0.564 |
| ruvB | Helicobacter pylori 26695 |
55.987 |
91.691 |
0.513 |
| ruvB | Synechocystis sp. PCC 6803 |
55.016 |
91.691 |
0.504 |