Detailed information NTG0129649

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LG36_RS09005
• Genome accession: NZ_CP009472
• Coordinates: 1890617..1892827 (-)
• Length: 736 a.a.
• NCBI ID: WP_038601811.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain AI06
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1885617..1897827

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG36_RS08975 (LG36_1721)	atpA	1885661..1887163 (-)	1503	WP_004255265.1	F0F1 ATP synthase subunit alpha	-
LG36_RS08980 (LG36_1722)	-	1887350..1887877 (-)	528	WP_029344288.1	F0F1 ATP synthase subunit delta	-
LG36_RS08985 (LG36_1723)	atpF	1887879..1888385 (-)	507	WP_010906128.1	F0F1 ATP synthase subunit B	-
LG36_RS08990 (LG36_1724)	atpB	1888400..1889113 (-)	714	WP_038601808.1	F0F1 ATP synthase subunit A	-
LG36_RS08995 (LG36_1725)	-	1889158..1889373 (-)	216	WP_004255250.1	F0F1 ATP synthase subunit C	-
LG36_RS09000 (LG36_1726)	-	1889557..1890333 (-)	777	WP_029344289.1	alpha/beta hydrolase family protein	-
LG36_RS09005 (LG36_1727)	comEC	1890617..1892827 (-)	2211	WP_038601811.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LG36_RS09010 (LG36_1728)	comEA	1892808..1893455 (-)	648	WP_038601812.1	ComEA family DNA-binding protein	Machinery gene
LG36_RS09015 (LG36_1729)	-	1893515..1894876 (-)	1362	WP_038601815.1	ABC transporter permease	-
LG36_RS09020 (LG36_1730)	-	1894873..1895805 (-)	933	WP_038601819.1	ABC transporter ATP-binding protein	-
LG36_RS09025 (LG36_1731)	-	1895909..1896307 (-)	399	WP_038601821.1	hypothetical protein	-
LG36_RS09030 (LG36_1732)	-	1896411..1896974 (-)	564	WP_038601823.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 84500.31 Da
• Isoelectric Point: 9.6771

>NTDB_id=129649 LG36_RS09005 WP_038601811.1 1890617..1892827(-) (comEC) [Lactococcus lactis strain AI06]
MSCVLNKIPLIFLAYLSVILYFLIFNFNLLCLILFIFSSLLALYRKYYLVIPLLLVMGSFFLVVKMDTIKNSENQPTTLS
KITMIPDTIQVNGDLLSFLGKERGQNYQVYETLKSKKDQKFYQNLSQNCQLSFTGNLQIPEKQRNFNGFDNQKYLESQNI
YRQIMIDKTNKIVLNDTFDLHVLRRKAIVWSQTHFPKPMNDYMTGLLFGFLSKDFNQMGDIYSSLGIIHLFALSGMQVNF
FIDWFRRIILRLGITREKLNIWQIPFSIFYAFMTGFSVSVLRALFQKNIRQNSLDNLAVTTLLLMIVSPKFLLTTGGQLT
LFYAFVISMISHKFSELKGIRKLLTESLVISLSVLPLLILDFHIFQPFSILLTIGFGFLFDVILLPLLLGTFLLSLIGYS
FNINLIFQILEWLIHEVDLPLHYPLVLGNPRPIELLILFFLIGLLIDNLFKKRRQIIFAGLIVCSFFICKNPIYPSITAV
DIGQGDSIFLQDKFNKETILIDTGGRLALPQESWQKPQSQTNAEKTLIPYLESVGVSQIDQLILTHTDADHVGDFLNLAD
KIKIKEIWVSPGELTNNHFVQKLKKANIAIHISKVGDKIPIFDSALQVLSNGYTGKGDNNDSIVTYGNFYHTKFLFTGDL
EQEGEKELLKNYPKLKVDVLKVGHHGSKTSSNPDFIKEINPKLALISVGKENRYGHPNQETLETLKKYQIRILRTDQKGA
LKLMQINQQWRIQTVR

Nucleotide

• Length: 2211 bp

>NTDB_id=129649 LG36_RS09005 WP_038601811.1 1890617..1892827(-) (comEC) [Lactococcus lactis strain AI06]
ATGAGTTGTGTTTTGAATAAAATTCCTTTGATATTTTTAGCTTACCTTTCTGTTATCTTGTATTTTTTAATCTTCAATTT
TAATTTACTTTGTCTCATTTTGTTCATTTTTTCAAGTTTACTTGCCTTATATAGAAAATATTATTTAGTCATCCCACTTT
TATTAGTTATGGGAAGTTTTTTCTTAGTAGTAAAAATGGATACGATTAAGAACAGTGAAAATCAGCCAACCACTCTTTCC
AAAATTACAATGATCCCCGACACGATCCAAGTTAATGGTGATTTATTAAGTTTTCTAGGAAAAGAAAGAGGACAAAATTA
TCAAGTTTACGAGACTCTAAAAAGCAAAAAAGATCAGAAATTTTATCAAAATCTAAGTCAAAATTGTCAGCTGAGTTTCA
CAGGAAACCTTCAAATTCCAGAAAAACAAAGAAATTTTAATGGATTCGATAACCAAAAGTATTTAGAGAGCCAGAATATT
TATCGGCAAATTATGATTGATAAAACTAATAAAATAGTTTTAAATGACACTTTTGACCTCCATGTTTTAAGACGAAAAGC
AATTGTCTGGTCACAAACTCATTTTCCAAAGCCAATGAATGACTATATGACTGGCTTACTTTTTGGCTTTTTAAGTAAAG
ATTTTAATCAAATGGGAGACATTTATAGTTCATTAGGAATTATTCATCTTTTTGCCTTATCGGGAATGCAAGTTAATTTT
TTCATTGATTGGTTTCGTAGAATTATTCTTCGACTAGGAATAACGAGAGAAAAATTAAATATTTGGCAAATTCCCTTTTC
AATCTTTTATGCATTTATGACAGGATTTTCGGTTTCAGTATTACGAGCTTTATTTCAAAAAAATATTCGTCAAAATTCTT
TAGATAATCTAGCGGTGACAACCCTTCTTCTGATGATTGTCAGTCCTAAATTTTTACTGACAACAGGAGGACAACTCACT
TTATTTTATGCTTTTGTTATTTCAATGATTAGTCATAAATTTTCAGAACTAAAAGGAATAAGAAAATTACTGACAGAATC
ATTAGTGATTTCTTTGAGTGTTTTACCTTTACTCATTTTGGATTTTCATATTTTTCAACCTTTTTCAATTTTACTGACGA
TTGGCTTTGGATTTTTATTTGATGTAATCTTATTGCCTTTACTATTAGGAACTTTTCTCTTGTCTCTAATTGGCTATAGT
TTTAATATAAATCTTATTTTTCAAATTCTTGAATGGCTAATTCATGAGGTTGATTTACCCTTGCATTATCCTTTGGTTTT
AGGGAATCCCAGGCCAATTGAATTATTAATCTTATTTTTCCTAATCGGTTTGTTAATTGATAATCTTTTTAAGAAAAGAA
GACAAATAATTTTTGCTGGCCTAATTGTTTGTAGTTTTTTTATTTGTAAAAATCCAATTTACCCCAGTATCACAGCAGTT
GATATTGGTCAAGGGGATAGTATTTTTTTGCAAGATAAATTTAATAAAGAAACAATTTTGATTGATACAGGCGGACGATT
AGCCCTTCCGCAAGAAAGTTGGCAAAAACCTCAAAGTCAAACAAATGCCGAAAAAACACTCATTCCATATCTTGAATCTG
TTGGAGTAAGTCAAATCGACCAGCTCATTTTGACGCATACGGACGCTGACCATGTTGGAGATTTTTTGAATTTAGCTGAT
AAAATAAAAATAAAAGAAATTTGGGTTAGCCCCGGTGAATTGACAAATAATCATTTTGTACAAAAATTGAAGAAAGCAAA
TATTGCGATTCACATCAGTAAAGTTGGAGATAAAATTCCAATCTTTGATAGTGCTTTACAAGTTTTATCAAATGGTTATA
CAGGAAAAGGGGATAATAATGATTCTATCGTGACTTATGGAAATTTTTATCATACAAAATTTCTATTTACAGGGGATTTA
GAACAAGAAGGAGAAAAAGAACTGCTCAAGAATTATCCTAAATTGAAAGTTGATGTCTTAAAAGTAGGTCATCATGGCAG
TAAAACAAGTTCAAACCCTGACTTTATTAAAGAAATTAATCCCAAACTTGCTCTCATTTCGGTTGGCAAGGAAAATCGAT
ATGGACATCCCAACCAAGAAACTCTAGAAACATTAAAAAAATACCAAATCAGAATACTTAGAACCGATCAAAAGGGAGCG
CTTAAACTAATGCAAATCAATCAACAGTGGCGAATCCAAACAGTTAGATAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (483-689)

• Competence protein (Competence) (206-446)

• Domain of unknown function (DUF4131) (DUF4131) (28-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	76.902	100	0.769
comEC/celB	Streptococcus mitis SK321	45.148	100	0.455
comEC/celB	Streptococcus mitis NCTC 12261	44.879	100	0.452
comEC/celB	Streptococcus pneumoniae TIGR4	44.28	100	0.447
comEC/celB	Streptococcus pneumoniae Rx1	43.876	100	0.443
comEC/celB	Streptococcus pneumoniae D39	43.876	100	0.443
comEC/celB	Streptococcus pneumoniae R6	43.876	100	0.443