Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | IX91_RS13210 | Genome accession | NZ_CP009354 |
| Coordinates | 2900989..2901525 (-) | Length | 178 a.a. |
| NCBI ID | WP_004747186.1 | Uniprot ID | F9TAJ8 |
| Organism | Vibrio tubiashii ATCC 19109 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2895989..2906525
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IX91_RS13190 (IX91_13470) | - | 2896389..2896694 (-) | 306 | WP_408068356.1 | MSHA biogenesis protein MshK | - |
| IX91_RS13195 (IX91_13475) | - | 2896705..2897355 (-) | 651 | WP_004747192.1 | type II secretion system protein M | - |
| IX91_RS13200 (IX91_13480) | - | 2897355..2898797 (-) | 1443 | WP_004747190.1 | hypothetical protein | - |
| IX91_RS13205 (IX91_13485) | csrD | 2898806..2900824 (-) | 2019 | WP_004747187.1 | RNase E specificity factor CsrD | - |
| IX91_RS13210 (IX91_13490) | ssb | 2900989..2901525 (-) | 537 | WP_004747186.1 | single-stranded DNA-binding protein | Machinery gene |
| IX91_RS13215 (IX91_13495) | qstR | 2901809..2902459 (+) | 651 | WP_004747184.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| IX91_RS13220 (IX91_13500) | galU | 2902578..2903453 (+) | 876 | WP_004747183.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| IX91_RS13225 (IX91_13505) | uvrA | 2903594..2906416 (+) | 2823 | WP_004747181.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 19627.72 Da Isoelectric Point: 5.2157
>NTDB_id=128868 IX91_RS13210 WP_004747186.1 2900989..2901525(-) (ssb) [Vibrio tubiashii ATCC 19109]
MASRGVNKVILVGNLGSDPEVRYMPSGGAVANITIATSESWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYV
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGSRAQGGAPGQGMGQQQQPQQGGWGQPQQPAMQHQPAQQPQSQPQQ
AQPQYNEPPMDFDDDIPF
MASRGVNKVILVGNLGSDPEVRYMPSGGAVANITIATSESWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYV
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGSRAQGGAPGQGMGQQQQPQQGGWGQPQQPAMQHQPAQQPQSQPQQ
AQPQYNEPPMDFDDDIPF
Nucleotide
Download Length: 537 bp
>NTDB_id=128868 IX91_RS13210 WP_004747186.1 2900989..2901525(-) (ssb) [Vibrio tubiashii ATCC 19109]
ATGGCTAGCCGTGGAGTTAACAAAGTTATTTTAGTCGGTAATCTGGGCTCTGACCCAGAAGTACGTTACATGCCAAGTGG
CGGTGCTGTAGCCAATATTACTATCGCGACGTCTGAATCGTGGCGTGATAAAGCCACTGGCGAACAGCGTGAAAAAACGG
AATGGCACCGTGTTGCACTATTCGGCAAGTTAGCTGAAGTTGCTGGTGAATATCTACGTAAGGGCTCTCAAGTTTACGTT
GAAGGCCAACTTCAAACTCGTAAGTGGCAAGATCAAAGTGGTCAAGATCGCTACACAACAGAAGTTGTCGTTCAAGGCTT
TAACGGCGTAATGCAAATGCTTGGTAGCCGTGCTCAAGGCGGAGCTCCAGGTCAAGGTATGGGCCAACAGCAGCAACCTC
AACAAGGTGGATGGGGACAACCTCAGCAGCCTGCAATGCAGCATCAACCAGCTCAACAGCCGCAGTCACAACCACAACAA
GCTCAGCCTCAGTACAATGAGCCGCCAATGGATTTTGATGACGACATCCCATTCTAA
ATGGCTAGCCGTGGAGTTAACAAAGTTATTTTAGTCGGTAATCTGGGCTCTGACCCAGAAGTACGTTACATGCCAAGTGG
CGGTGCTGTAGCCAATATTACTATCGCGACGTCTGAATCGTGGCGTGATAAAGCCACTGGCGAACAGCGTGAAAAAACGG
AATGGCACCGTGTTGCACTATTCGGCAAGTTAGCTGAAGTTGCTGGTGAATATCTACGTAAGGGCTCTCAAGTTTACGTT
GAAGGCCAACTTCAAACTCGTAAGTGGCAAGATCAAAGTGGTCAAGATCGCTACACAACAGAAGTTGTCGTTCAAGGCTT
TAACGGCGTAATGCAAATGCTTGGTAGCCGTGCTCAAGGCGGAGCTCCAGGTCAAGGTATGGGCCAACAGCAGCAACCTC
AACAAGGTGGATGGGGACAACCTCAGCAGCCTGCAATGCAGCATCAACCAGCTCAACAGCCGCAGTCACAACCACAACAA
GCTCAGCCTCAGTACAATGAGCCGCCAATGGATTTTGATGACGACATCCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
84.444 |
100 |
0.854 |
| ssb | Glaesserella parasuis strain SC1401 |
56.842 |
100 |
0.607 |
| ssb | Neisseria meningitidis MC58 |
47.283 |
100 |
0.489 |
| ssb | Neisseria gonorrhoeae MS11 |
47.283 |
100 |
0.489 |