Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | IX91_RS13215 | Genome accession | NZ_CP009354 |
| Coordinates | 2901809..2902459 (+) | Length | 216 a.a. |
| NCBI ID | WP_004747184.1 | Uniprot ID | F9TAJ7 |
| Organism | Vibrio tubiashii ATCC 19109 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2896809..2907459
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IX91_RS13200 (IX91_13480) | - | 2897355..2898797 (-) | 1443 | WP_004747190.1 | hypothetical protein | - |
| IX91_RS13205 (IX91_13485) | csrD | 2898806..2900824 (-) | 2019 | WP_004747187.1 | RNase E specificity factor CsrD | - |
| IX91_RS13210 (IX91_13490) | ssb | 2900989..2901525 (-) | 537 | WP_004747186.1 | single-stranded DNA-binding protein | Machinery gene |
| IX91_RS13215 (IX91_13495) | qstR | 2901809..2902459 (+) | 651 | WP_004747184.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| IX91_RS13220 (IX91_13500) | galU | 2902578..2903453 (+) | 876 | WP_004747183.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| IX91_RS13225 (IX91_13505) | uvrA | 2903594..2906416 (+) | 2823 | WP_004747181.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 25002.01 Da Isoelectric Point: 8.0878
>NTDB_id=128869 IX91_RS13215 WP_004747184.1 2901809..2902459(+) (qstR) [Vibrio tubiashii ATCC 19109]
MAKNIYARTIYFLTENKSVNPIIERLERQMEIAIPTMAPDDLLLALQQYKHRILIIDYQEYTQLKNVISELPLADKSFET
IIFNVSHRLTTDELLAFGHLKAVFYQDIDIEQLVKGYEGVINGETWLPRKVTAQLLFHYRNVVDTHTTPATVDLTTREMQ
ILRCLMSGASNTQIADDMFISEFTVKSHLQKVFKKLSVKNRVQAAAWAKQHMRPMS
MAKNIYARTIYFLTENKSVNPIIERLERQMEIAIPTMAPDDLLLALQQYKHRILIIDYQEYTQLKNVISELPLADKSFET
IIFNVSHRLTTDELLAFGHLKAVFYQDIDIEQLVKGYEGVINGETWLPRKVTAQLLFHYRNVVDTHTTPATVDLTTREMQ
ILRCLMSGASNTQIADDMFISEFTVKSHLQKVFKKLSVKNRVQAAAWAKQHMRPMS
Nucleotide
Download Length: 651 bp
>NTDB_id=128869 IX91_RS13215 WP_004747184.1 2901809..2902459(+) (qstR) [Vibrio tubiashii ATCC 19109]
ATGGCTAAAAACATCTATGCACGAACTATTTACTTTCTCACAGAAAACAAGTCTGTAAATCCAATCATTGAACGTTTAGA
GAGACAAATGGAGATCGCTATCCCGACAATGGCACCCGATGATTTGTTACTCGCCCTACAGCAGTATAAGCATCGCATCT
TGATCATTGATTACCAAGAATATACCCAACTTAAAAACGTGATTAGTGAACTCCCTTTGGCAGACAAATCATTTGAAACC
ATCATTTTTAATGTCTCTCATCGTTTGACCACAGACGAGCTATTGGCATTTGGTCATTTGAAAGCTGTCTTCTACCAAGA
TATAGACATAGAGCAGCTCGTCAAAGGATATGAAGGGGTTATCAATGGTGAAACTTGGTTGCCAAGAAAAGTCACGGCAC
AGTTACTGTTCCACTACCGTAATGTTGTTGACACCCATACCACGCCCGCAACCGTCGACTTAACCACTAGAGAAATGCAA
ATTTTGCGCTGTTTAATGTCTGGGGCTTCCAACACTCAAATCGCAGACGATATGTTTATCAGTGAGTTCACCGTTAAATC
TCACTTGCAGAAGGTTTTTAAGAAACTAAGCGTCAAGAATCGTGTCCAGGCTGCCGCTTGGGCCAAACAACATATGCGGC
CAATGTCTTAA
ATGGCTAAAAACATCTATGCACGAACTATTTACTTTCTCACAGAAAACAAGTCTGTAAATCCAATCATTGAACGTTTAGA
GAGACAAATGGAGATCGCTATCCCGACAATGGCACCCGATGATTTGTTACTCGCCCTACAGCAGTATAAGCATCGCATCT
TGATCATTGATTACCAAGAATATACCCAACTTAAAAACGTGATTAGTGAACTCCCTTTGGCAGACAAATCATTTGAAACC
ATCATTTTTAATGTCTCTCATCGTTTGACCACAGACGAGCTATTGGCATTTGGTCATTTGAAAGCTGTCTTCTACCAAGA
TATAGACATAGAGCAGCTCGTCAAAGGATATGAAGGGGTTATCAATGGTGAAACTTGGTTGCCAAGAAAAGTCACGGCAC
AGTTACTGTTCCACTACCGTAATGTTGTTGACACCCATACCACGCCCGCAACCGTCGACTTAACCACTAGAGAAATGCAA
ATTTTGCGCTGTTTAATGTCTGGGGCTTCCAACACTCAAATCGCAGACGATATGTTTATCAGTGAGTTCACCGTTAAATC
TCACTTGCAGAAGGTTTTTAAGAAACTAAGCGTCAAGAATCGTGTCCAGGCTGCCGCTTGGGCCAAACAACATATGCGGC
CAATGTCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio campbellii strain DS40M4 |
52.83 |
98.148 |
0.519 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
52.358 |
98.148 |
0.514 |
| qstR | Vibrio cholerae strain A1552 |
49.296 |
98.611 |
0.486 |