Detailed information NTG0128028

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SpyM6D471_RS05160
• Genome accession: NZ_CP011415
• Coordinates: 1048165..1049127 (-)
• Length: 320 a.a.
• NCBI ID: WP_002983995.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain D471
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1043165..1054127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SpyM6D471_RS05145 (SpyM6D471_05140)	-	1044002..1044709 (-)	708	WP_011017939.1	O-methyltransferase	-
SpyM6D471_RS05150 (SpyM6D471_05145)	-	1044775..1045971 (-)	1197	WP_047149492.1	OFA family MFS transporter	-
SpyM6D471_RS05155 (SpyM6D471_05150)	pepF	1046347..1048152 (-)	1806	WP_047149493.1	oligoendopeptidase F	Regulator
SpyM6D471_RS05160 (SpyM6D471_05155)	coiA	1048165..1049127 (-)	963	WP_002983995.1	competence protein CoiA	Machinery gene
SpyM6D471_RS05165 (SpyM6D471_05160)	-	1049423..1050139 (-)	717	WP_011184662.1	pseudouridine synthase	-
SpyM6D471_RS05170 (SpyM6D471_05165)	nagB	1050258..1050962 (-)	705	WP_021340443.1	glucosamine-6-phosphate deaminase	-
SpyM6D471_RS05175 (SpyM6D471_05170)	queA	1051164..1052192 (+)	1029	WP_011184664.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
SpyM6D471_RS05180 (SpyM6D471_05175)	-	1052199..1053419 (+)	1221	WP_011184665.1	DUF3114 domain-containing protein	-
SpyM6D471_RS05185 (SpyM6D471_05180)	-	1053533..1054123 (-)	591	WP_011184666.1	serine hydrolase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37801.25 Da
• Isoelectric Point: 10.2848

>NTDB_id=128028 SpyM6D471_RS05160 WP_002983995.1 1048165..1049127(-) (coiA) [Streptococcus pyogenes strain D471]
MTKILTALDGKNQLISLVTQPISTKPPFRCPACKSPVRLRQGTIRRPHFAHVQLAHCQFQAENESEEHLTLKAKLYTSLV
RTEAVCIEKYLPELQQIADLWVNDKLALEIQCSPLPVERLKKRTKAYQEKGYPVRWLLGRKLWLNTHLTALQKQFLYFSS
SLGFHLWELDAAANLLRLKYLIHEDLFGKVSYLTKTISLDHNIMEMFRLPYQQEILYSYQKKMTVNLSKRIQRALLARHP
KWLRRQEKAYLSGYNLLMLTTDAFYPQWRPVQSSSGFCQIKGNLRPYYESFKVYYKKEKDKKVQTLFSPKYYVKMDSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=128028 SpyM6D471_RS05160 WP_002983995.1 1048165..1049127(-) (coiA) [Streptococcus pyogenes strain D471]
GTGACAAAAATATTAACCGCTTTAGATGGTAAGAATCAGCTCATTTCGCTAGTAACTCAGCCTATTTCAACGAAACCGCC
TTTTCGTTGCCCAGCTTGCAAATCTCCTGTTCGCTTGCGTCAGGGGACAATTAGACGACCTCATTTTGCCCATGTACAAC
TAGCTCATTGTCAATTCCAAGCAGAAAATGAATCTGAGGAACATTTGACGTTGAAGGCAAAACTTTACACCAGTTTAGTC
CGAACAGAAGCTGTCTGTATTGAAAAATATCTTCCTGAGCTGCAACAGATAGCAGACCTTTGGGTGAATGATAAGTTAGC
CTTAGAAATTCAGTGCAGTCCCTTGCCAGTTGAGCGTCTAAAGAAACGCACCAAAGCCTATCAAGAAAAGGGGTATCCGG
TACGATGGTTACTGGGAAGAAAATTGTGGCTTAACACTCACTTAACTGCTTTGCAAAAACAGTTTCTTTACTTTTCATCT
AGTTTGGGCTTTCATTTGTGGGAGCTGGATGCAGCTGCAAATCTGCTACGTCTCAAATATTTAATCCATGAAGACTTATT
TGGTAAGGTAAGTTACCTAACCAAAACCATTTCTTTAGACCATAATATTATGGAAATGTTTCGGTTACCCTATCAGCAAG
AAATCCTTTATTCTTATCAGAAAAAAATGACTGTGAACCTATCTAAAAGAATACAAAGAGCTCTTTTAGCTAGACACCCG
AAATGGCTACGACGACAAGAAAAGGCTTACTTATCAGGCTATAATTTACTTATGTTAACAACTGATGCTTTTTATCCTCA
ATGGAGACCAGTTCAATCTTCCAGCGGTTTTTGTCAAATTAAAGGAAATCTTCGCCCTTATTATGAAAGTTTTAAAGTCT
ATTACAAAAAAGAAAAGGATAAGAAGGTGCAAACGCTTTTTTCACCAAAATATTATGTTAAAATGGATAGTAATAGAAAA
TAA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-265)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	42.903	96.875	0.416
coiA	Streptococcus pneumoniae Rx1	41.613	96.875	0.403
coiA	Streptococcus pneumoniae D39	41.613	96.875	0.403
coiA	Streptococcus pneumoniae R6	41.613	96.875	0.403
coiA	Streptococcus pneumoniae TIGR4	41.613	96.875	0.403
coiA	Lactococcus lactis subsp. cremoris KW2	39.329	100	0.403