Detailed information NTG0127440

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: JM48_RS01765
• Genome accession: NZ_CP009236
• Coordinates: 378413..380563 (+)
• Length: 716 a.a.
• NCBI ID: WP_053566437.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain 5-2
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 373413..385563

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JM48_RS01730 (JM48_0363)	-	373491..374237 (+)	747	WP_053566436.1	CPBP family intramembrane glutamic endopeptidase	-
JM48_RS01735	-	374369..374518 (+)	150	WP_003643807.1	hypothetical protein	-
JM48_RS01740 (JM48_0364)	-	374532..375872 (+)	1341	WP_003643808.1	GHKL domain-containing protein	-
JM48_RS01745 (JM48_0365)	-	375873..376616 (+)	744	WP_003643809.1	response regulator transcription factor	-
JM48_RS01750 (JM48_0366)	-	376921..377694 (-)	774	WP_003643810.1	CPBP family intramembrane glutamic endopeptidase	-
JM48_RS01755	plnF	377793..377951 (-)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
JM48_RS01760 (JM48_0367)	plnE	377976..378146 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
JM48_RS01765 (JM48_0368)	comA	378413..380563 (+)	2151	WP_053566437.1	peptide cleavage/export ABC transporter	Regulator
JM48_RS01770 (JM48_0369)	-	380579..381955 (+)	1377	WP_053566438.1	HlyD family secretion protein	-
JM48_RS16010	-	382044..382238 (+)	195	WP_236626692.1	hypothetical protein	-
JM48_RS01775 (JM48_0371)	-	382275..382733 (+)	459	WP_242449243.1	CPBP family intramembrane glutamic endopeptidase	-
JM48_RS01780 (JM48_0372)	-	382800..383468 (+)	669	WP_053566439.1	CPBP family intramembrane glutamic endopeptidase	-
JM48_RS01785 (JM48_0373)	-	383555..384235 (+)	681	WP_053566440.1	CPBP family intramembrane glutamic endopeptidase	-
JM48_RS01790 (JM48_0374)	-	384329..385015 (+)	687	WP_053566441.1	CPBP family intramembrane glutamic endopeptidase	-
JM48_RS01795 (JM48_0375)	-	385173..385463 (+)	291	WP_021356143.1	type II toxin-antitoxin system RelE/ParE family toxin	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79952.66 Da
• Isoelectric Point: 6.6531

>NTDB_id=127440 JM48_RS01765 WP_053566437.1 378413..380563(+) (comA) [Lactiplantibacillus plantarum strain 5-2]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFEVQDLPL
PFIAHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFVTRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=127440 JM48_RS01765 WP_053566437.1 378413..380563(+) (comA) [Lactiplantibacillus plantarum strain 5-2]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGAGGTACAAGATTTACCATTG
CCATTCATTGCGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACACATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGCCATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGTCACTCGGCGGACGGGGGAAATTGTTTCAAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAAAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTAGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATTGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (498-648)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• Peptidase C39 family (Peptidase_C39) (5-140)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.906	99.581	0.587
comA	Streptococcus pneumoniae D39	58.626	99.581	0.584
comA	Streptococcus pneumoniae R6	58.626	99.581	0.584
comA	Streptococcus pneumoniae Rx1	58.626	99.581	0.584
comA	Streptococcus pneumoniae TIGR4	58.485	99.581	0.582
comA	Streptococcus mitis SK321	58.345	99.581	0.581
comA	Streptococcus gordonii str. Challis substr. CH1	57.103	100	0.573
comA/nlmT	Streptococcus mutans UA159	54.318	100	0.545