Detailed information NTG0127405

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NJ8700_RS06720
• Genome accession: NZ_CP009230
• Coordinates: 1469939..1470388 (+)
• Length: 149 a.a.
• NCBI ID: WP_005701262.1
• Uniprot ID: -
• Organism: Aggregatibacter aphrophilus NJ8700
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1464939..1475388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NJ8700_RS06705 (NJ8700_06865)	pnp	1465918..1468047 (-)	2130	WP_005701259.1	polyribonucleotide nucleotidyltransferase	-
NJ8700_RS06710 (NJ8700_06870)	nanQ	1468317..1468787 (+)	471	WP_005701260.1	N-acetylneuraminate anomerase	-
NJ8700_RS06715 (NJ8700_06875)	ampD	1469260..1469814 (-)	555	WP_012771713.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
NJ8700_RS06720 (NJ8700_06880)	pilA	1469939..1470388 (+)	450	WP_005701262.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
NJ8700_RS06725 (NJ8700_06885)	pilB	1470413..1471822 (+)	1410	WP_005701263.1	GspE/PulE family protein	Machinery gene
NJ8700_RS06730 (NJ8700_06890)	pilC	1471815..1473053 (+)	1239	WP_005701265.1	type II secretion system F family protein	Machinery gene
NJ8700_RS06735 (NJ8700_06895)	-	1473050..1473742 (+)	693	WP_005701266.1	A24 family peptidase	-
NJ8700_RS06740 (NJ8700_06900)	coaE	1473795..1474415 (+)	621	WP_005701267.1	dephospho-CoA kinase	-
NJ8700_RS06745 (NJ8700_06905)	yacG	1474408..1474620 (+)	213	WP_005701268.1	DNA gyrase inhibitor YacG	-
NJ8700_RS06750 (NJ8700_06910)	-	1474620..1474886 (+)	267	WP_005701270.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 149 a.a.
• Molecular weight: 15303.75 Da
• Isoelectric Point: 8.8087

>NTDB_id=127405 NJ8700_RS06720 WP_005701262.1 1469939..1470388(+) (pilA) [Aggregatibacter aphrophilus NJ8700]
MKIQSAFLSVKSVKKGFTLIELMIVIAIVAILATVAIPSYQNYTKKAAVSELLQASAPLRSEVELCIYNTGSVENCTGGK
NGIQADVADATAKYVKSTAVKGGIITVVGKGSLDKVSYTLTAAGSATAGVTWTASCGTNADIFPAGFCS

Nucleotide

• Length: 450 bp

>NTDB_id=127405 NJ8700_RS06720 WP_005701262.1 1469939..1470388(+) (pilA) [Aggregatibacter aphrophilus NJ8700]
ATGAAAATTCAGTCAGCATTTCTTTCTGTGAAATCCGTTAAAAAAGGATTTACATTAATTGAATTAATGATCGTGATTGC
GATTGTCGCCATTTTGGCTACTGTCGCGATTCCATCTTACCAAAATTACACCAAAAAAGCGGCAGTTTCCGAATTGTTAC
AAGCCTCTGCTCCACTTCGTTCCGAAGTCGAACTGTGCATTTACAATACGGGTAGTGTTGAGAACTGCACCGGCGGAAAA
AATGGCATTCAAGCCGATGTCGCCGACGCTACCGCAAAATATGTGAAATCAACCGCAGTGAAAGGCGGCATCATTACCGT
GGTCGGAAAAGGCAGCTTGGATAAAGTGTCTTACACACTAACCGCGGCAGGTTCTGCAACTGCCGGCGTCACATGGACAG
CCTCTTGCGGCACTAACGCCGACATCTTTCCGGCCGGCTTCTGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (13-36)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Haemophilus influenzae 86-028NP	65.468	93.289	0.611
pilA	Haemophilus influenzae Rd KW20	63.83	94.631	0.604
pilA	Glaesserella parasuis strain SC1401	55.245	95.973	0.53