Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ASU1_RS05160 | Genome accession | NZ_CP009159 |
| Coordinates | 1134748..1135185 (-) | Length | 145 a.a. |
| NCBI ID | WP_014991735.1 | Uniprot ID | - |
| Organism | Actinobacillus suis ATCC 33415 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1129748..1140185
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ASU1_RS05135 (ASU1_05090) | yacG | 1130652..1130840 (-) | 189 | WP_005623139.1 | DNA gyrase inhibitor YacG | - |
| ASU1_RS05140 (ASU1_05095) | coaE | 1130822..1131460 (-) | 639 | WP_014991731.1 | dephospho-CoA kinase | - |
| ASU1_RS05145 (ASU1_05100) | - | 1131482..1132156 (-) | 675 | WP_014991732.1 | fimbrial protein | - |
| ASU1_RS05150 (ASU1_05105) | - | 1132156..1133349 (-) | 1194 | WP_014991733.1 | type II secretion system F family protein | - |
| ASU1_RS05155 (ASU1_05110) | pilB | 1133342..1134727 (-) | 1386 | WP_014991734.1 | GspE/PulE family protein | Machinery gene |
| ASU1_RS05160 (ASU1_05115) | pilA | 1134748..1135185 (-) | 438 | WP_014991735.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ASU1_RS05165 (ASU1_05120) | radA | 1135365..1136744 (+) | 1380 | WP_014991736.1 | DNA repair protein RadA | Machinery gene |
| ASU1_RS05170 (ASU1_05125) | pepB | 1136810..1138093 (+) | 1284 | WP_014991737.1 | aminopeptidase PepB | - |
| ASU1_RS05175 (ASU1_05130) | - | 1138221..1139156 (+) | 936 | WP_014991738.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| ASU1_RS05180 (ASU1_05135) | greB | 1139166..1139654 (+) | 489 | WP_014991739.1 | transcription elongation factor GreB | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 15395.62 Da Isoelectric Point: 7.6225
>NTDB_id=127150 ASU1_RS05160 WP_014991735.1 1134748..1135185(-) (pilA) [Actinobacillus suis ATCC 33415]
MKHIIKPIQQAFTLIELMIVIAIIAILATVAIPSYNNYTKKAALSELLAASSAYKTDVEICIYNTGATNSCFSGANGIKN
GDDLKNSKYLDSVSVTAGTITVNGKGSVAGYGYTLTPDYSSKTLTWKTTCSGEDKSLFPAAFCSE
MKHIIKPIQQAFTLIELMIVIAIIAILATVAIPSYNNYTKKAALSELLAASSAYKTDVEICIYNTGATNSCFSGANGIKN
GDDLKNSKYLDSVSVTAGTITVNGKGSVAGYGYTLTPDYSSKTLTWKTTCSGEDKSLFPAAFCSE
Nucleotide
Download Length: 438 bp
>NTDB_id=127150 ASU1_RS05160 WP_014991735.1 1134748..1135185(-) (pilA) [Actinobacillus suis ATCC 33415]
ATGAAACACATAATTAAACCGATACAACAGGCATTTACCCTGATTGAATTAATGATTGTGATTGCAATCATTGCAATTTT
AGCAACTGTGGCGATTCCTTCTTATAACAATTACACCAAAAAAGCGGCATTATCCGAACTGTTAGCGGCATCTTCTGCAT
ATAAAACGGATGTAGAAATTTGTATTTATAACACTGGAGCTACCAATAGCTGTTTTAGTGGAGCCAATGGCATTAAGAAT
GGCGATGATCTTAAAAATTCTAAGTATTTAGATTCAGTCTCTGTAACTGCCGGTACTATAACCGTGAATGGCAAGGGCAG
CGTAGCGGGATATGGTTATACACTTACACCGGATTATTCAAGTAAAACACTGACGTGGAAAACAACCTGTTCAGGAGAGG
ATAAAAGTTTATTCCCCGCAGCATTTTGCTCGGAATAA
ATGAAACACATAATTAAACCGATACAACAGGCATTTACCCTGATTGAATTAATGATTGTGATTGCAATCATTGCAATTTT
AGCAACTGTGGCGATTCCTTCTTATAACAATTACACCAAAAAAGCGGCATTATCCGAACTGTTAGCGGCATCTTCTGCAT
ATAAAACGGATGTAGAAATTTGTATTTATAACACTGGAGCTACCAATAGCTGTTTTAGTGGAGCCAATGGCATTAAGAAT
GGCGATGATCTTAAAAATTCTAAGTATTTAGATTCAGTCTCTGTAACTGCCGGTACTATAACCGTGAATGGCAAGGGCAG
CGTAGCGGGATATGGTTATACACTTACACCGGATTATTCAAGTAAAACACTGACGTGGAAAACAACCTGTTCAGGAGAGG
ATAAAAGTTTATTCCCCGCAGCATTTTGCTCGGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Glaesserella parasuis strain SC1401 |
60.274 |
100 |
0.607 |
| pilA | Haemophilus influenzae Rd KW20 |
56.738 |
97.241 |
0.552 |
| pilA | Haemophilus influenzae 86-028NP |
56.429 |
96.552 |
0.545 |
| comP | Acinetobacter baylyi ADP1 |
42.254 |
97.931 |
0.414 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.552 |
100 |
0.366 |