Detailed information NTG0127131

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: JL26_RS08695
• Genome accession: NZ_CP009158
• Coordinates: 1744588..1745715 (+)
• Length: 375 a.a.
• NCBI ID: WP_038514770.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain SH03
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1739588..1750715

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JL26_RS08670 (JL26_08910)	selA	1740093..1741478 (-)	1386	WP_038514767.1	L-seryl-tRNA(Sec) selenium transferase	-
JL26_RS08680	-	1741918..1742607 (-)	690	WP_131269497.1	hypothetical protein	-
JL26_RS12380	-	1742567..1742710 (-)	144	WP_198351640.1	hypothetical protein	-
JL26_RS08685 (JL26_08930)	rfaD	1742802..1743728 (-)	927	WP_035525215.1	ADP-glyceromanno-heptose 6-epimerase	-
JL26_RS08690 (JL26_08935)	def	1743740..1744252 (-)	513	WP_005712670.1	peptide deformylase	-
JL26_RS08695 (JL26_08940)	dprA	1744588..1745715 (+)	1128	WP_038514770.1	DNA-processing protein DprA	Machinery gene
JL26_RS08700 (JL26_08945)	-	1745768..1746604 (+)	837	WP_021115110.1	heme/hemin ABC transporter substrate-binding protein	-
JL26_RS08705 (JL26_08950)	-	1746604..1747590 (+)	987	WP_038514773.1	FecCD family ABC transporter permease	-
JL26_RS08710 (JL26_08955)	-	1747590..1748378 (+)	789	WP_038514776.1	heme ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41724.73 Da
• Isoelectric Point: 5.4085

>NTDB_id=127131 JL26_RS08695 WP_038514770.1 1744588..1745715(+) (dprA) [Glaesserella parasuis strain SH03]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQALQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAVN
ENGITIAVLGSGLDQVYPARHKKLAEQIVETSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNSVQNPYSEGCHKLIKEGALLVENVEDILDAIAWQRQSVHIQPSLFDTKPKQAVKSDPKFAKNLPEL
TACQQQLFEQISLEPISIDDLAKATDMAVETALIELLNLELLGVVKPVSGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=127131 JL26_RS08695 WP_038514770.1 1744588..1745715(+) (dprA) [Glaesserella parasuis strain SH03]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCACAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATATGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATCGATCAGGCGTTGCAATGGGCGGAACAGGATCAGCAACGGATTTTAACTTTATTT
GACGAAGATTATCCTTTCTTGCTGAAGCAGATCAGCACCGCTCCTCCAGTGCTTTTTGTGCGGGGGAATGTTGAAAGTTT
ATCGTTACCGCAGATAGCTATCGTCGGCAGTCGAGATTACTCCCACTATGGCGAACACTGGGCAGGGCATTTTTCGGCGG
AATTAGTGAAACATCAACTTGCTGTCACTAGTGGTTTAGCCATAGGCATAGACGGATTTTGTCATCAGCGTGCGGTCAAT
GAAAACGGGATTACTATTGCGGTTTTAGGCAGTGGTTTAGACCAAGTTTACCCTGCTCGCCACAAAAAACTTGCTGAACA
AATCGTTGAAACAAGCGGTGCATTAGTGTCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAGAATTTCCCTAGACGAA
ATCGTATTATCAGCGGATTATCGCTAGGCACATTGGTTATTGAAGCCACGGTGAACAGTGGCTCGCTCATCACTGCTCGT
TATGCGTTAGAGCAAGGACGAGAAGTTTTTGCATTGCCGAACTCAGTACAAAACCCGTATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTGCTGGTTGAAAATGTTGAAGATATTTTAGATGCGATTGCGTGGCAACGGCAGTCAGTGCATA
TTCAACCAAGTCTATTTGATACGAAACCTAAACAAGCGGTGAAATCCGACCCCAAATTTGCAAAAAATCTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATCAGCATTGATGATCTTGCCAAAGCGACGGATAT
GGCGGTAGAAACCGCATTGATTGAGCTGCTGAATTTGGAGTTGTTGGGCGTAGTGAAGCCGGTGAGTGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (313-371)

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	98.133	100	0.981
dprA	Haemophilus influenzae Rd KW20	53.529	90.667	0.485
dprA	Vibrio campbellii strain DS40M4	47.185	99.467	0.469
dprA	Vibrio cholerae strain A1552	44.681	100	0.448
dprA	Legionella pneumophila strain ERS1305867	39.947	100	0.403
dprA	Neisseria gonorrhoeae MS11	43.312	83.733	0.363