Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   FE90_RS10340 Genome accession   NZ_CP008695
Coordinates   341573..341749 (+) Length   58 a.a.
NCBI ID   WP_419865977.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M23ND     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 336573..346749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FE90_RS01825 (FE90_0343) - 338034..338633 (+) 600 WP_010922159.1 glycoside hydrolase family 73 protein -
  FE90_RS01830 (FE90_0344) - 338785..339492 (+) 708 WP_002990206.1 glycoside hydrolase family 73 protein -
  FE90_RS09745 - 339549..339824 (-) 276 Protein_339 IS3 family transposase -
  FE90_RS10335 - 340064..340429 (-) 366 WP_148305425.1 exotoxin beta-grasp domain-containing protein -
  FE90_RS01845 (FE90_0348) - 340449..341474 (-) 1026 WP_038433199.1 IdeS/Mac family cysteine endopeptidase -
  FE90_RS10340 (FE90_0349) prx 341573..341749 (+) 177 WP_419865977.1 Paratox Regulator
  FE90_RS01850 (FE90_0350) - 341978..342135 (+) 158 Protein_343 nucleoside-diphosphate kinase -
  FE90_RS01855 (FE90_0351) - 342382..342762 (+) 381 WP_038433201.1 DUF1149 family protein -
  FE90_RS01860 (FE90_0352) - 342762..343610 (+) 849 WP_011017667.1 DegV family protein -
  FE90_RS01865 (FE90_0353) - 343735..344943 (+) 1209 WP_011017668.1 CCA tRNA nucleotidyltransferase -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6890.92 Da        Isoelectric Point: 7.0136

>NTDB_id=123616 FE90_RS10340 WP_419865977.1 341573..341749(+) (prx) [Streptococcus pyogenes strain M23ND]
MFNKRKQAIDNGDITRDTVVVVLKNGRFFDDMLLHEEVSNRRAVIEERREEALMKLDK

Nucleotide


Download         Length: 177 bp        

>NTDB_id=123616 FE90_RS10340 WP_419865977.1 341573..341749(+) (prx) [Streptococcus pyogenes strain M23ND]
ATTTTTAATAAACGTAAACAAGCGATTGACAATGGAGATATCACAAGAGACACAGTAGTGGTTGTGCTTAAAAATGGACG
GTTTTTTGATGATATGTTGCTGCATGAGGAAGTGAGCAATAGGAGAGCTGTGATAGAAGAAAGAAGAGAAGAAGCGTTGA
TGAAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

54.386

98.276

0.534
  prx Streptococcus pyogenes MGAS315

52.632

98.276

0.517
  prx Streptococcus pyogenes MGAS8232

47.368

98.276

0.466
  prx Streptococcus pyogenes MGAS315

45.614

98.276

0.448
  prx Streptococcus pyogenes MGAS315

53.846

67.241

0.362

Multiple sequence alignment