Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   WS08_RS00370 Genome accession   NZ_CP007588
Coordinates   74351..75490 (+) Length   379 a.a.
NCBI ID   WP_038536379.1    Uniprot ID   A0A075TXS3
Organism   Weissella tructae strain WS08     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 69351..80490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WS08_RS00355 (WS08_0053) yycH 71086..72402 (+) 1317 WP_009495694.1 two-component system activity regulator YycH -
  WS08_RS00360 (WS08_0054) yycI 72431..73237 (+) 807 WP_009495693.1 two-component system regulatory protein YycI -
  WS08_RS00365 (WS08_0055) - 73284..74060 (+) 777 WP_038527995.1 MBL fold metallo-hydrolase -
  WS08_RS00370 (WS08_0056) htrA 74351..75490 (+) 1140 WP_038536379.1 S1C family serine protease Regulator
  WS08_RS00375 (WS08_0057) - 75745..76173 (-) 429 WP_009495690.1 DUF1934 domain-containing protein -
  WS08_RS00380 (WS08_0058) - 76349..77713 (+) 1365 WP_009495689.1 HD domain-containing protein -
  WS08_RS00385 (WS08_0059) - 77743..78555 (+) 813 WP_009495688.1 Cof-type HAD-IIB family hydrolase -
  WS08_RS00390 (WS08_0060) rpoE 78653..79234 (+) 582 WP_009495687.1 DNA-directed RNA polymerase subunit delta -

Sequence


Protein


Download         Length: 379 a.a.        Molecular weight: 39757.08 Da        Isoelectric Point: 5.5767

>NTDB_id=121371 WS08_RS00370 WP_038536379.1 74351..75490(+) (htrA) [Weissella tructae strain WS08]
MKKTMKTVVIALLAGLIGGGLSVGLGAYYGVFEPKTEKVVNSSDTKVADTAVKDDSKATQAFKSVSGAIVSVINLQGSQN
SDELLETASEGSGVIYKSSGRDAYVVTNNHVVDGSKKIQILMQDGTKEPAELVGTDVETDLAVLKISNKAVKDVAKFANS
DQLQPGETALAIGSPLGSEYATSVTEGIISAPKREIETQAPNGQRLGKTTVIQTDAAINPGNSGGALVNLAGQVVGINSM
KLSTSQSGTAVEGMGFAIPANTVVKIIEALEKDGKVTRPSLGVSLYDLSNISSVDQADVLKLPTKVKTGVVVIKTTRDGS
AEKAGLKKFDVITKLNDISVSDANDLRNALYKFDVNEKITVTYYRDGKEQTVQLQLQSN

Nucleotide


Download         Length: 1140 bp        

>NTDB_id=121371 WS08_RS00370 WP_038536379.1 74351..75490(+) (htrA) [Weissella tructae strain WS08]
ATGAAAAAAACGATGAAGACAGTCGTTATTGCGCTGTTGGCTGGATTGATTGGTGGTGGACTTTCTGTAGGGCTTGGTGC
TTATTATGGTGTCTTTGAACCTAAAACAGAAAAAGTAGTTAATTCATCAGATACGAAAGTAGCAGATACAGCAGTGAAAG
ATGATTCGAAAGCAACGCAAGCCTTTAAATCGGTGTCTGGTGCAATTGTGTCAGTTATCAATCTCCAAGGTAGCCAAAAT
AGTGATGAGTTGTTAGAGACGGCGTCAGAGGGGTCAGGGGTTATTTATAAGAGCTCTGGTCGTGATGCGTATGTCGTGAC
GAATAATCACGTTGTAGATGGATCTAAGAAAATACAAATCTTAATGCAAGATGGAACGAAAGAACCGGCCGAATTAGTTG
GGACAGATGTTGAAACTGATTTGGCGGTGTTGAAGATTTCGAATAAAGCGGTGAAAGATGTCGCTAAATTTGCAAATTCT
GATCAATTGCAACCTGGTGAAACAGCATTGGCGATTGGGTCTCCATTAGGATCGGAATACGCTACTTCTGTGACGGAAGG
AATTATTTCTGCGCCAAAACGTGAAATTGAAACGCAAGCACCGAATGGACAACGTCTAGGAAAAACAACGGTTATTCAAA
CTGACGCAGCGATTAACCCAGGAAACTCTGGTGGTGCATTGGTTAATCTGGCGGGGCAAGTTGTTGGGATTAATTCAATG
AAGTTGTCAACGTCACAATCCGGAACGGCAGTTGAAGGAATGGGATTTGCGATTCCAGCGAATACGGTTGTGAAAATTAT
TGAAGCATTAGAAAAAGATGGTAAAGTCACACGACCAAGTTTGGGTGTTTCTTTGTATGATTTGAGTAATATTTCTTCGG
TCGATCAAGCGGATGTATTAAAATTGCCAACGAAAGTGAAGACTGGAGTTGTTGTGATCAAGACGACCCGCGATGGTTCA
GCTGAAAAGGCTGGGCTGAAAAAGTTTGATGTCATTACGAAGTTGAATGATATTTCAGTTTCTGATGCAAATGACTTACG
TAATGCGTTATATAAGTTCGATGTGAATGAAAAAATCACCGTAACATATTATCGTGATGGTAAAGAACAGACGGTTCAAT
TGCAGTTACAGTCGAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A075TXS3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

48.579

100

0.496

  htrA Streptococcus mitis NCTC 12261

46.032

99.736

0.459

  htrA Streptococcus mutans UA159

49.008

93.14

0.456

  htrA Streptococcus pneumoniae TIGR4

48.378

89.446

0.433

  htrA Streptococcus pneumoniae D39

48.378

89.446

0.433

  htrA Streptococcus pneumoniae Rx1

48.378

89.446

0.433

  htrA Streptococcus pneumoniae R6

48.378

89.446

0.433


Multiple sequence alignment