Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   NMA510612_RS10620 Genome accession   NZ_CP007524
Coordinates   2031356..2032852 (-) Length   498 a.a.
NCBI ID   WP_002249586.1    Uniprot ID   X5FBG9
Organism   Neisseria meningitidis strain 510612     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 2026356..2037852
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA510612_RS10590 (NMA510612_2344) - 2027114..2028304 (+) 1191 WP_050389241.1 class I SAM-dependent methyltransferase -
  NMA510612_RS10605 (NMA510612_2347) - 2028886..2029707 (-) 822 WP_002239524.1 undecaprenyl-diphosphate phosphatase -
  NMA510612_RS10610 (NMA510612_2348) dsbA1 2029740..2030384 (-) 645 WP_002212479.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMA510612_RS10615 (NMA510612_2349) ftsN 2030387..2031250 (-) 864 WP_002234558.1 cell division protein FtsN -
  NMA510612_RS10620 (NMA510612_2350) comM 2031356..2032852 (-) 1497 WP_002249586.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  NMA510612_RS10625 (NMA510612_2351) - 2032866..2033186 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  NMA510612_RS10635 (NMA510612_2353) putP 2033668..2035194 (+) 1527 WP_002236704.1 sodium/proline symporter PutP -
  NMA510612_RS14600 (NMA510612_2355) - 2035284..2035451 (-) 168 WP_009346312.1 hypothetical protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 53567.64 Da        Isoelectric Point: 6.9339

>NTDB_id=120329 NMA510612_RS10620 WP_002249586.1 2031356..2032852(-) (comM) [Neisseria meningitidis strain 510612]
MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGR
FDLPIAIGILAASGQVAPEKLAEYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
GEVAAHLNGIEPLAQTECQVPQMPFEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL
TEDELVEVWALRSLLPNHQQQLDSHRPFRSPHHSASAAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
ENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHLVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSLSAAELMQQ
EAGESSASVLERVIAARDKQYARQGKVNAALSVSELDTSARIQKEAQEALGGLLEKLSLSARSFHRIMRVARTLADLAGD
EEVGRSHVMKAIGFRRAL

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=120329 NMA510612_RS10620 WP_002249586.1 2031356..2032852(-) (comM) [Neisseria meningitidis strain 510612]
ATGTCGCTTGCCTTGGTTTACAGCCGCGCCTTGAGCGGTATGAATGCGCCGTTGGTCGAAGTGGAAGCCCACCTTGCCAA
CGGCCTGCCGCATTTCAACATCGTCGGGCTGCCCGATACGGAAGTAAAGGAAAGCCGCGACCGCGTCCGTGCCGCCATTA
TTCAAAGCGGTTTTGAATTCCCCGCCAAAAAAATTACCGTCAACCTCGCCCCCGCCGACCTGCCCAAAGAGTCGGGGCGT
TTCGATTTGCCGATTGCAATCGGCATCCTTGCCGCATCGGGGCAGGTTGCGCCCGAAAAACTGGCGGAATACGAGTTTGC
GGGGGAATTGGCACTGTCGGGGCTGTTGCGCCCCGTGCGCGGCGCGTTGGCGATGGCGTGGCAGGGTATGCAGGCAAAAC
GTGCATTTGTTTTGCCTGAAGAAAACGCAGGACAAGCCGCCGTGATGCGCGGCATTACCGTTTACGGCGCGCGCTCTTTG
GGCGAAGTCGCCGCCCATTTGAACGGCATCGAACCTTTGGCGCAAACCGAATGCCAAGTTCCTCAGATGCCGTTTGAACA
TGGCGGACAACCTGATTTGTGCGATGTGAAAGGTCAGCACACCGCGCGCCTTGCTTTGGAAATCGCTGCCGCAGGCGGAC
ACAGCCTCTTGATGATGGGTCCGCCGGGAACGGGCAAGTCTATGCTCTCCCAACGGCTGCCCGGCATCCTGCCGCCGCTG
ACCGAAGACGAATTGGTAGAAGTTTGGGCATTGCGTTCGCTCCTGCCCAACCACCAGCAACAACTCGACAGCCACCGTCC
TTTCCGCAGTCCGCATCACAGCGCCAGTGCGGCGGCTATGGTCGGCGGCGGTTCGGATCCGCGTCCGGGCGAGATTTCAT
TGGCGCACCACGGCGTATTGTTTTTGGACGAGCTGCCCGAGTTCGACCGCAAAGTTTTAGAAGTTTTGCGCGAACCGTTG
GAAAACGGCGAAATCCACATTTCCCGCGCGGCGCGCCAAGCCGTCTATCCGGCGAAATTCCAACTTGTTGCCGCCATGAA
CCCCTGCCCGTGCGGTTATCTCGGGCATCTCGTCAAACCCTGCCGCTGCACACCCGAAAGCGTCGCGCGTTACCGCAGCA
AAATTTCCGGCCCGTTGCTTGACCGCATCGATTTGACCATCGAAGTCCCGAGCCTGTCCGCCGCCGAACTGATGCAGCAG
GAAGCAGGGGAAAGCAGCGCGTCCGTTTTGGAACGCGTTATCGCCGCTAGAGACAAACAATACGCACGGCAAGGCAAAGT
GAATGCCGCCTTGAGTGTCAGTGAACTCGACACATCCGCCCGCATTCAAAAAGAAGCGCAGGAAGCATTGGGCGGCCTGC
TGGAAAAACTCTCCCTTTCCGCCCGCAGCTTCCACCGCATTATGCGCGTGGCGCGTACATTGGCGGATTTGGCGGGCGAC
GAAGAAGTCGGCAGAAGCCACGTCATGAAAGCCATAGGTTTCCGTCGCGCTTTATAG

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-495)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB X5FBG9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

53.187

100

0.536
  comM Vibrio campbellii strain DS40M4

52.4

100

0.526
  comM Haemophilus influenzae Rd KW20

50.298

100

0.508
  comM Glaesserella parasuis strain SC1401

49.307

100

0.5
  comM Legionella pneumophila str. Paris

46.535

100

0.472
  comM Legionella pneumophila strain ERS1305867

46.535

100

0.472
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

42.717

100

0.436

Multiple sequence alignment