Detailed information NTG0120162

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: CL52_RS02560
• Genome accession: NZ_CP007511
• Coordinates: 566587..567651 (+)
• Length: 354 a.a.
• NCBI ID: WP_043218298.1
• Uniprot ID: A0A8D3XYD2
• Organism: Stutzerimonas balearica DSM 6083 strain DSM6083 (=SP1402)
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 561587..572651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CL52_RS02540 (CL52_02590)	-	561669..562040 (-)	372	Protein_521	transglycosylase domain-containing protein	-
CL52_RS20990 (CL52_02595)	-	562005..562427 (+)	423	WP_043218292.1	hypothetical protein	-
CL52_RS02550 (CL52_02600)	-	562587..563852 (+)	1266	WP_043218294.1	malic enzyme-like NAD(P)-binding protein	-
CL52_RS02555 (CL52_02605)	-	563994..566405 (-)	2412	WP_043218296.1	penicillin-binding protein 1A	-
CL52_RS02560 (CL52_02610)	pilM	566587..567651 (+)	1065	WP_043218298.1	pilus assembly protein PilM	Machinery gene
CL52_RS02565 (CL52_02615)	-	567651..568223 (+)	573	WP_043218300.1	PilN domain-containing protein	-
CL52_RS02570 (CL52_02620)	pilO	568220..568843 (+)	624	WP_043218303.1	type 4a pilus biogenesis protein PilO	-
CL52_RS02575 (CL52_02625)	pilP	568840..569367 (+)	528	WP_043218306.1	type 4a pilus biogenesis lipoprotein PilP	-
CL52_RS02580 (CL52_02630)	pilQ	569423..571504 (+)	2082	WP_043218307.1	type IV pilus secretin PilQ	Machinery gene
CL52_RS02585 (CL52_02635)	aroK	571509..572054 (+)	546	WP_061339736.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37892.36 Da
• Isoelectric Point: 4.5789

>NTDB_id=120162 CL52_RS02560 WP_043218298.1 566587..567651(+) (pilM) [Stutzerimonas balearica DSM 6083 strain DSM6083 (=SP1402)]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVARAKTGCKQAAV
AVSGSAVITKTIEMDGGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGPAARAPGRVDVLLAACRKENVEIREAALAL
AGLSAKVVDVEAYALERSYDLLAPMLAQGHADLTVAIVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYETEVLQPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPDLDRLIQQKVGTQTMVANP
FADMALSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=120162 CL52_RS02560 WP_043218298.1 566587..567651(+) (pilM) [Stutzerimonas balearica DSM 6083 strain DSM6083 (=SP1402)]
GTGCTAGGGCTCTTCACTAAGAAAGCGAATACGCTACTTGGGATCGACATTAGTTCGACCTCGGTCAAGCTCCTGGAATT
AAGCCGCTCAGGCAATCGCTATCGGGTCGAGGCGTACGCCGTTGAGCCTTTGCCGCCCAACGCAGTGGTCGAGAAGAACA
TTGCCGAGCTGGAGGGGGTCGGGCAGGCCCTGCAGCGTGTTGTGGCGCGCGCCAAGACCGGTTGCAAGCAAGCCGCTGTC
GCTGTCTCCGGCTCGGCGGTCATTACCAAGACCATCGAAATGGACGGCGGCCTGAGCGATGACGAGCTGGAGAATCAGCT
CAAGATCGAGGCGGACCAGTACATTCCTTACCCGCTCGAAGAAGTTGCCATCGATTTCGAGGTTCAGGGTCCTGCGGCGC
GCGCGCCTGGGCGCGTGGACGTGCTGCTTGCGGCCTGTCGCAAGGAGAACGTGGAGATCCGCGAGGCCGCTCTAGCGCTC
GCCGGTCTGAGCGCAAAGGTGGTCGATGTAGAGGCGTATGCGCTAGAGCGGTCCTACGATCTGCTCGCGCCCATGCTTGC
ACAGGGGCACGCCGATCTCACCGTCGCCATCGTCGATATTGGCGCCACCATGACCACGCTCAGTGTGCTGCACAACGGCC
GTACCATTTATACCCGGGAGCAGCTGTTTGGCGGTCGCCAGCTCACCGAGGAAATTCAGCGTCGCTACGGGCTTTCGGTG
GAGGAGGCAGGGCTGGCGAAGAAACAGGGTGGCTTGCCGGACGACTACGAAACCGAAGTGTTGCAGCCGTTCAAGGAGGC
GGTCGTTCAGCAGGTGTCGCGCTCACTGCAGTTCTTTTTCGCAGCCGGTCAGTTCCATGACGTGGATTGCATTCTGCTGG
CAGGTGGCACGGCTTCGATACCGGATCTCGACCGGCTCATCCAGCAGAAGGTGGGCACGCAGACCATGGTTGCCAATCCG
TTCGCCGACATGGCGCTGAGCAGCAAGGTCAACGCCGGGGCGCTGGCGAGCGATGCGCCCGCGCTGATGATTGCCTGTGG
CCTGGCCCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	57.062	100	0.571
comM	Acinetobacter nosocomialis M2	57.062	100	0.571
comM	Acinetobacter baylyi ADP1	53.955	100	0.54
pilM	Legionella pneumophila strain ERS1305867	48.023	100	0.48