Detailed information NTG1170831

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACOFKU_RS13100
• Genome accession: NZ_OZ241361
• Coordinates: 2841968..2842834 (+)
• Length: 288 a.a.
• NCBI ID: WP_419812595.1
• Uniprot ID: -
• Organism: MAG: Bacterioplanoides sp. isolate a8483998-2d78-4028-8a03-01e39642ae96
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2836968..2847834

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOFKU_RS13085	-	2837051..2837821 (+)	771	WP_419812592.1	SDR family oxidoreductase	-
ACOFKU_RS13090	-	2837922..2838971 (+)	1050	WP_419812593.1	SMP-30/gluconolactonase/LRE family protein	-
ACOFKU_RS13095	-	2839069..2841807 (-)	2739	WP_419812594.1	S8 family peptidase	-
ACOFKU_RS13100	comM	2841968..2842834 (+)	867	WP_419812595.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
ACOFKU_RS13105	-	2843475..2843819 (+)	345	WP_419812596.1	hypothetical protein	-
ACOFKU_RS13110	-	2843822..2845123 (+)	1302	WP_419813675.1	type II toxin-antitoxin system HipA family toxin	-
ACOFKU_RS13115	-	2845729..2846118 (+)	390	WP_419812597.1	TA system antitoxin ParD family protein	-
ACOFKU_RS13120	-	2846136..2846720 (+)	585	WP_419812598.1	hypothetical protein	-
ACOFKU_RS13125	-	2846970..2847476 (-)	507	Protein_2570	helix-turn-helix domain-containing protein	-

Sequence

Protein

• Length: 288 a.a.
• Molecular weight: 30980.53 Da
• Isoelectric Point: 6.4991

>NTDB_id=1170831 ACOFKU_RS13100 WP_419812595.1 2841968..2842834(+) (comM) [MAG: Bacterioplanoides sp. isolate a8483998-2d78-4028-8a03-01e39642ae96]
MSLARIHTRAQLGIDAPRVYVEVHLSSGLPSLSLVGLPETAVKESKDRVRSAILNSGFEFPAKRITINLAPADLPKDGGR
YDLAIALGILVASEQVSEKRLEGHEFIGELALNGELQPIPGVLPAALQTAKAEQRLVLPESNAEEAALCTSGQFYAASSL
LEVTAYLQGQDSLRDIVPIDAAHIEKNPLMPDLLDVRGQPQAKRALEIAAAGQHNLLFIGPPGTGKTMLASRLPGIMPPM
SEEEALVSASIYSISNQQHDWQKQWRVRPFRSPHHTASGVALVGGCKF

Nucleotide

• Length: 867 bp

>NTDB_id=1170831 ACOFKU_RS13100 WP_419812595.1 2841968..2842834(+) (comM) [MAG: Bacterioplanoides sp. isolate a8483998-2d78-4028-8a03-01e39642ae96]
ATGTCACTCGCCCGAATTCATACCCGTGCTCAGCTGGGCATTGATGCTCCCCGTGTGTATGTGGAAGTGCACCTGTCCAG
CGGATTACCTTCTCTGAGTTTAGTGGGATTACCAGAAACTGCTGTTAAAGAAAGTAAAGATCGGGTGCGTTCCGCCATTC
TTAACAGTGGCTTTGAATTCCCAGCCAAGCGCATCACCATTAATCTGGCTCCGGCCGACTTACCCAAAGACGGTGGTCGT
TATGATCTGGCGATTGCGCTGGGGATTCTGGTCGCTTCTGAGCAGGTGTCTGAAAAACGTTTAGAAGGTCATGAATTTAT
TGGCGAGCTGGCGTTAAACGGTGAATTGCAGCCGATTCCCGGGGTGCTACCCGCGGCGTTGCAGACAGCCAAAGCGGAAC
AACGCCTGGTGCTGCCCGAATCCAATGCCGAAGAAGCGGCGTTATGCACCAGTGGCCAGTTTTATGCGGCCAGTTCTTTA
CTGGAGGTGACGGCCTATTTACAGGGGCAGGACAGCCTGCGCGATATTGTGCCGATTGATGCCGCCCATATCGAAAAAAA
TCCACTGATGCCGGATTTACTTGATGTCCGTGGCCAGCCACAGGCCAAACGGGCGCTGGAGATCGCTGCCGCGGGGCAAC
ATAACCTGCTGTTTATTGGCCCGCCCGGTACCGGCAAAACCATGTTAGCCAGCCGTTTGCCGGGCATTATGCCGCCGATG
TCAGAAGAAGAAGCGCTGGTATCGGCCTCAATTTATTCGATTTCTAATCAGCAGCATGACTGGCAAAAACAATGGCGTGT
GCGGCCTTTCCGCTCGCCACACCATACGGCTTCTGGTGTGGCACTAGTGGGCGGTTGTAAGTTCTAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (192-286)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	59.649	98.958	0.59
comM	Vibrio campbellii strain DS40M4	58.596	98.958	0.58
comM	Haemophilus influenzae Rd KW20	53.979	100	0.542
comM	Glaesserella parasuis strain SC1401	53.846	99.306	0.535
comM	Legionella pneumophila str. Paris	52.281	98.958	0.517
comM	Legionella pneumophila strain ERS1305867	52.281	98.958	0.517
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.448	100	0.437