Detailed information NTG1170740

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACOCLE_RS14345
• Genome accession: NZ_OZ239981
• Coordinates: 3173649..3174713 (-)
• Length: 354 a.a.
• NCBI ID: WP_419533041.1
• Uniprot ID: -
• Organism: MAG: Endozoicomonas sp. isolate 83fe6ec3-ea9b-4b46-8e1a-20fbcf80582c
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3168649..3179713

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOCLE_RS14320	aroK	3169000..3169521 (-)	522	WP_419533036.1	shikimate kinase AroK	-
ACOCLE_RS14325	pilQ	3169648..3171684 (-)	2037	WP_419533037.1	type IV pilus secretin PilQ	Machinery gene
ACOCLE_RS14330	-	3171945..3172481 (-)	537	WP_419533038.1	pilus assembly protein PilP	-
ACOCLE_RS14335	-	3172478..3173089 (-)	612	WP_419533039.1	type 4a pilus biogenesis protein PilO	-
ACOCLE_RS14340	-	3173086..3173649 (-)	564	WP_419533040.1	PilN domain-containing protein	-
ACOCLE_RS14345	pilM	3173649..3174713 (-)	1065	WP_419533041.1	pilus assembly protein PilM	Machinery gene
ACOCLE_RS14350	-	3175046..3177523 (+)	2478	WP_419533042.1	penicillin-binding protein 1A	-
ACOCLE_RS14355	-	3177658..3178554 (+)	897	WP_419533043.1	LysR family transcriptional regulator	-
ACOCLE_RS14360	-	3178599..3179078 (-)	480	WP_419533044.1	nucleoside deaminase	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38205.36 Da
• Isoelectric Point: 4.2296

>NTDB_id=1170740 ACOCLE_RS14345 WP_419533041.1 3173649..3174713(-) (pilM) [MAG: Endozoicomonas sp. isolate 83fe6ec3-ea9b-4b46-8e1a-20fbcf80582c]
MFGLLKNKSNAVLGVDISSTSVKVLELGLSGSQYKVEAFSVEPLPPGAVVENNIHELDVTGEAVAKALSQSRTSLKSAAV
AVSGSAVITKNIEMDASLSDAEMETQITVEADQYIPYAMDEVAIDFEVQGLNEKNPERVEVLLAACRRDNVEMREEALRL
GGLKTKIVDVEAFAMERACELIEGQLDLPDEDPVLAVVDIGATKTTLNVISRGKTVYTREQLFGGRQLTDEIQRRYGLTP
DEAEKAKCRGGLPDDYEPEVLDPFRETVVQQISRSLQFFYSSSQFNDVDAIALVGGSASIPGLEEMIESKLGTPTKVANP
FAGMSMAGKVDVDKLASEAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1170740 ACOCLE_RS14345 WP_419533041.1 3173649..3174713(-) (pilM) [MAG: Endozoicomonas sp. isolate 83fe6ec3-ea9b-4b46-8e1a-20fbcf80582c]
GTGTTTGGGCTGCTGAAAAACAAATCGAATGCCGTTTTAGGGGTGGACATAAGCTCGACGTCTGTCAAAGTCCTTGAGTT
GGGACTTAGCGGCAGTCAGTACAAGGTCGAGGCTTTCAGTGTTGAACCCCTTCCTCCGGGGGCTGTCGTTGAAAACAATA
TTCATGAGCTGGATGTTACCGGTGAAGCGGTTGCCAAGGCACTCTCCCAATCAAGAACCAGTCTTAAGTCTGCTGCCGTT
GCCGTATCAGGTTCTGCTGTAATTACCAAGAATATAGAAATGGATGCCTCCCTCAGTGATGCTGAGATGGAAACGCAGAT
TACTGTTGAGGCTGATCAATACATTCCCTATGCCATGGACGAGGTCGCTATTGACTTTGAGGTTCAGGGGTTGAATGAAA
AGAACCCCGAGCGTGTTGAGGTTCTTTTGGCTGCCTGCCGACGCGATAATGTTGAGATGCGGGAAGAAGCCCTGAGACTG
GGTGGCCTGAAGACAAAAATTGTTGATGTTGAAGCTTTTGCCATGGAACGGGCCTGTGAGCTGATAGAGGGCCAGTTAGA
CCTGCCTGATGAAGATCCCGTCCTTGCCGTTGTTGATATTGGCGCTACCAAGACAACACTGAATGTCATTTCTCGAGGTA
AGACTGTTTATACACGGGAGCAGCTTTTTGGGGGGCGTCAGCTTACTGATGAAATCCAGCGTCGTTATGGCTTGACTCCG
GATGAGGCTGAAAAAGCCAAATGTCGCGGCGGCTTGCCAGATGACTATGAGCCAGAAGTTCTTGACCCATTCAGAGAAAC
TGTCGTTCAGCAAATTTCCCGCTCGCTGCAGTTTTTTTACTCCTCCAGCCAGTTTAATGATGTGGATGCAATTGCACTGG
TTGGAGGCTCTGCATCAATTCCGGGATTAGAGGAAATGATTGAGAGCAAACTTGGGACTCCAACCAAAGTAGCTAACCCT
TTTGCTGGAATGTCCATGGCTGGAAAAGTTGATGTGGATAAGCTGGCCAGTGAGGCTCCTTCCCTGATGATTGCCTGTGG
CCTTGCCATGAGGAGCTTTGACTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.695	100	0.517
comM	Acinetobacter nosocomialis M2	51.695	100	0.517
comM	Acinetobacter baylyi ADP1	47.74	100	0.477
pilM	Legionella pneumophila strain ERS1305867	43.22	100	0.432