Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | AW03_RS12085 | Genome accession | NZ_CP007173 |
| Coordinates | 2361047..2361343 (-) | Length | 98 a.a. |
| NCBI ID | WP_014477332.1 | Uniprot ID | - |
| Organism | Bacillus subtilis HJ5 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2356047..2366343
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW03_RS12040 (AW03_023200) | tasA | 2356455..2357240 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| AW03_RS12045 (AW03_023210) | sipW | 2357304..2357876 (-) | 573 | WP_080030740.1 | signal peptidase I SipW | - |
| AW03_RS12050 (AW03_023220) | tapA | 2357860..2358621 (-) | 762 | WP_015384085.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AW03_RS12055 (AW03_023230) | yqzG | 2358891..2359217 (+) | 327 | WP_015384086.1 | YqzG/YhdC family protein | - |
| AW03_RS12060 (AW03_023240) | spoIITA | 2359259..2359438 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| AW03_RS12065 (AW03_023250) | comGG | 2359511..2359885 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| AW03_RS12070 | comGF | 2359886..2360269 (-) | 384 | WP_015384087.1 | ComG operon protein ComGF | Machinery gene |
| AW03_RS12075 (AW03_023270) | comGE | 2360295..2360642 (-) | 348 | WP_015384088.1 | ComG operon protein 5 | Machinery gene |
| AW03_RS12080 (AW03_023280) | comGD | 2360626..2361057 (-) | 432 | WP_015384089.1 | comG operon protein ComGD | Machinery gene |
| AW03_RS12085 (AW03_023290) | comGC | 2361047..2361343 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| AW03_RS12090 (AW03_023300) | comGB | 2361357..2362394 (-) | 1038 | WP_015483430.1 | comG operon protein ComGB | Machinery gene |
| AW03_RS12095 (AW03_023310) | comGA | 2362381..2363451 (-) | 1071 | WP_015483431.1 | competence protein ComGA | Machinery gene |
| AW03_RS12105 (AW03_023320) | corA | 2363861..2364814 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| AW03_RS12110 (AW03_023330) | yqhB | 2364957..2366285 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10830.69 Da Isoelectric Point: 6.4730
>NTDB_id=117052 AW03_RS12085 WP_014477332.1 2361047..2361343(-) (comGC) [Bacillus subtilis HJ5]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKHIIITGGEVKVEH
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKHIIITGGEVKVEH
Nucleotide
Download Length: 297 bp
>NTDB_id=117052 AW03_RS12085 WP_014477332.1 2361047..2361343(-) (comGC) [Bacillus subtilis HJ5]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATTGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCCTACAAAACATGGTTAAGGCACAAATGACCG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGGAAGCACATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATTGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCCTACAAAACATGGTTAAGGCACAAATGACCG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGGAAGCACATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
98.98 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
93.878 |
0.388 |
| comGC | Staphylococcus aureus N315 |
41.304 |
93.878 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
49.333 |
76.531 |
0.378 |