Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   ACLV7H_RS04305 Genome accession   NZ_OZ217340
Coordinates   806827..809067 (+) Length   746 a.a.
NCBI ID   WP_411866453.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 801827..814067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS04285 (SORA22_08570) - 801968..804079 (+) 2112 WP_411866210.1 G5 domain-containing protein -
  ACLV7H_RS04290 (SORA22_08580) ald 804268..805380 (-) 1113 WP_411866450.1 alanine dehydrogenase -
  ACLV7H_RS04295 (SORA22_08590) - 805557..806126 (+) 570 WP_411866451.1 GNAT family N-acetyltransferase -
  ACLV7H_RS04300 (SORA22_08600) comEA/celA/cilE 806193..806843 (+) 651 WP_411866452.1 helix-hairpin-helix domain-containing protein Machinery gene
  ACLV7H_RS04305 (SORA22_08610) comEC/celB 806827..809067 (+) 2241 WP_411866453.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACLV7H_RS04310 - 809254..809442 (+) 189 WP_045591667.1 hypothetical protein -
  ACLV7H_RS04315 (SORA22_08620) - 809475..810068 (+) 594 WP_411866454.1 ATP-binding cassette domain-containing protein -
  ACLV7H_RS04320 (SORA22_08630) - 810065..811249 (+) 1185 WP_411866455.1 hypothetical protein -
  ACLV7H_RS04325 (SORA22_08650) infC 811554..812084 (+) 531 WP_411866456.1 translation initiation factor IF-3 -
  ACLV7H_RS04330 (SORA22_08660) rpmI 812117..812317 (+) 201 WP_001125942.1 50S ribosomal protein L35 -
  ACLV7H_RS04335 (SORA22_08670) rplT 812369..812728 (+) 360 WP_411866457.1 50S ribosomal protein L20 -

Sequence


Protein


Download         Length: 746 a.a.        Molecular weight: 84594.86 Da        Isoelectric Point: 8.8359

>NTDB_id=1169955 ACLV7H_RS04305 WP_411866453.1 806827..809067(+) (comEC/celB) [Streptococcus oralis isolate S. oralis A22]
MSQWIKNFPIPLIYLSFLLLWLYYAILGASYLALLGFVFLLVCLFFQFPWKPAGKVLAICGVFGFWFLFQTWQQSQASQN
LVDSVERVRILPDTIKVNGDSLSFRGKAEGHTFQVYYKLQSEEEKELFQTLTDLHEIELEGKLSEPEGQRNFGGFNYQAY
LKTQGIYQTLTIKSIQSMKQVSSWDIGENLSSLRRKAVVWIKMHFPDPMRNYMTGLLLGHLDTDFEEMNELYSSLGIIHL
FALSGMQVGFFMDAFKKLLLRLGLTQEKLKWLTYPFSLIYAGLTGFSASVIRSLLQKLLAQHGIKGLDNFALTILVLFII
MPNFFLTAGGVLSCAYAFILTVTSKEGEGLKAVARESLVISLGILPILSFYFAEFQPWSILLTFVFSFLFDVVFLPLLSI
LFILSFVYPVTQFNLVFEWLECIIRLVSQLASRPLVFGQPNAWLLILLLVSLALVYDMRKNIKRLAGFSLFIVGLFFLTK
HPLENEITMLDVGQGESIFLRDVTGKTILIDVGGKAESDKKIQAWQQKSTASNAQRTLIPYLKSRGVDKIDQLILTNTEK
EHVGDLLEVTRAFQVGEILVSKGSLTQKEFVAELQATQTKVRSVTGGENLPIFGSYLEVLSTRKMGDGSHDDSLFLYGRL
LDKHFLFTGNLKEKGEKDLLKQYSTLEVDVLKVGQHGSKTSSDPVFLEKLKPEITLISVGKNNRAKLPHQETLTRLETIN
SKIYRTDQNGAIRFKGWKSWQIESVC

Nucleotide


Download         Length: 2241 bp        

>NTDB_id=1169955 ACLV7H_RS04305 WP_411866453.1 806827..809067(+) (comEC/celB) [Streptococcus oralis isolate S. oralis A22]
ATGTCACAGTGGATTAAGAATTTCCCTATCCCCCTAATCTATCTGAGCTTTCTGTTGCTCTGGCTTTACTATGCCATTTT
AGGAGCGTCCTATCTCGCACTGCTAGGTTTTGTTTTTTTGCTCGTCTGTCTCTTTTTCCAATTTCCTTGGAAACCGGCTG
GAAAAGTTCTAGCGATTTGTGGAGTTTTTGGATTTTGGTTTCTGTTTCAAACTTGGCAACAAAGTCAAGCTAGTCAAAAC
CTAGTGGATTCTGTTGAAAGGGTACGGATTTTGCCTGACACTATTAAGGTCAATGGAGATAGTCTGTCCTTTCGGGGCAA
GGCTGAGGGTCACACCTTCCAAGTTTATTATAAACTCCAGTCCGAGGAAGAGAAAGAGCTCTTTCAGACCTTAACAGACC
TTCATGAGATTGAACTAGAAGGAAAACTTTCGGAACCCGAAGGGCAGAGGAATTTTGGTGGCTTTAACTACCAAGCCTAT
CTGAAGACTCAAGGAATTTACCAAACTTTGACTATCAAGAGTATCCAGTCAATGAAACAGGTTAGCAGTTGGGATATAGG
AGAAAATCTGTCTAGTTTACGTCGAAAGGCTGTAGTTTGGATCAAGATGCACTTTCCAGATCCTATGCGCAACTATATGA
CAGGTCTTCTTTTAGGACATTTGGACACAGACTTTGAGGAGATGAATGAGCTCTATTCTAGTCTTGGAATTATCCATCTC
TTTGCCTTGTCGGGCATGCAGGTGGGCTTCTTTATGGATGCCTTTAAGAAACTCCTCTTACGATTGGGCTTGACCCAAGA
AAAGTTGAAGTGGCTAACTTATCCCTTTTCTCTTATCTATGCAGGTCTGACAGGATTTTCAGCTTCGGTTATTCGCAGTC
TCTTGCAAAAGTTACTAGCACAACATGGTATTAAGGGCTTGGATAATTTTGCCTTGACGATCCTTGTCCTCTTTATCATC
ATGCCCAACTTTTTCTTGACAGCAGGAGGAGTCTTGTCCTGCGCATACGCTTTTATCTTGACCGTGACTAGTAAAGAAGG
GGAGGGACTCAAGGCTGTTGCTAGAGAAAGTCTGGTCATTTCTTTGGGAATATTACCCATTCTATCCTTTTATTTTGCAG
AATTTCAGCCTTGGTCTATTCTTTTGACCTTTGTCTTTTCCTTTCTGTTTGATGTGGTATTTTTACCGCTTTTGTCCATC
TTATTCATTCTGTCTTTTGTTTACCCAGTCACTCAGTTTAACCTTGTCTTTGAGTGGTTGGAGTGTATCATTCGCTTGGT
ATCGCAGCTGGCAAGTAGGCCCCTGGTCTTTGGTCAACCCAACGCATGGCTGTTGATTCTACTGTTAGTTTCATTAGCCT
TAGTCTATGACATGAGGAAAAACATTAAAAGACTAGCAGGATTTAGTCTCTTTATTGTGGGTCTCTTTTTCCTGACCAAG
CATCCACTTGAAAATGAAATTACCATGCTAGATGTTGGGCAGGGAGAAAGCATTTTTCTAAGGGATGTAACTGGGAAAAC
CATTCTCATAGATGTGGGTGGAAAGGCAGAATCCGACAAAAAAATCCAAGCTTGGCAGCAAAAGTCGACGGCTAGCAATG
CCCAGCGAACCTTGATTCCCTATCTTAAAAGTCGTGGAGTAGACAAGATTGACCAGCTGATTTTGACCAACACAGAGAAA
GAGCATGTTGGAGATTTACTAGAGGTGACCAGGGCTTTCCAAGTCGGGGAGATTTTAGTATCAAAAGGAAGTTTGACACA
GAAAGAATTTGTGGCAGAACTACAAGCGACTCAAACCAAGGTACGCAGTGTGACAGGGGGGGAGAATTTACCGATTTTTG
GCAGTTACTTAGAAGTCCTATCTACAAGGAAGATGGGAGATGGAAGTCATGATGATTCTCTTTTTCTTTATGGGAGGCTT
TTGGATAAGCACTTTCTCTTTACTGGAAACTTGAAGGAGAAGGGAGAAAAGGATCTTCTAAAGCAATACTCTACCTTAGA
GGTGGATGTCTTAAAAGTCGGTCAACATGGTTCTAAAACCTCATCAGATCCAGTTTTCCTAGAAAAACTCAAACCAGAAA
TTACTCTCATTTCAGTTGGAAAGAACAATCGTGCGAAACTCCCCCATCAGGAAACCTTGACACGACTAGAAACCATCAAT
AGTAAAATTTACCGAACTGACCAGAACGGAGCTATTCGCTTTAAAGGTTGGAAAAGTTGGCAAATCGAAAGTGTTTGTTA
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis SK321

87.383

99.866

0.873

  comEC/celB Streptococcus mitis NCTC 12261

87.114

99.866

0.87

  comEC/celB Streptococcus pneumoniae TIGR4

86.577

99.866

0.865

  comEC/celB Streptococcus pneumoniae Rx1

86.04

99.866

0.859

  comEC/celB Streptococcus pneumoniae D39

86.04

99.866

0.859

  comEC/celB Streptococcus pneumoniae R6

86.04

99.866

0.859

  comEC Lactococcus lactis subsp. cremoris KW2

44.324

99.196

0.44


Multiple sequence alignment