Detailed information NTG1166999

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: AB2L98_RS24870
• Genome accession: NZ_OZ111366
• Coordinates: 5127006..5128526 (+)
• Length: 506 a.a.
• NCBI ID: WP_004181640.1
• Uniprot ID: A0A0C7KD86
• Organism: Klebsiella pneumoniae strain Zagreb046 isolate Zagreb046
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 5122006..5133526

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2L98_RS24845	ilvE	5123566..5124495 (-)	930	WP_002883171.1	branched-chain-amino-acid transaminase	-
AB2L98_RS24850	ilvM	5124512..5124769 (-)	258	WP_002883170.1	acetolactate synthase 2 small subunit	-
AB2L98_RS24855	ilvG	5124766..5126412 (-)	1647	WP_002883142.1	acetolactate synthase 2 catalytic subunit	-
AB2L98_RS24860	ilvX	5126415..5126468 (-)	54	WP_201281575.1	peptide IlvX	-
AB2L98_RS24865	ilvL	5126553..5126651 (-)	99	WP_001311244.1	ilv operon leader peptide	-
AB2L98_RS24870	comM	5127006..5128526 (+)	1521	WP_004181640.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
AB2L98_RS24875	-	5128552..5128890 (-)	339	WP_004146520.1	DUF413 domain-containing protein	-
AB2L98_RS24880	hdfR	5129009..5129830 (+)	822	WP_004181639.1	HTH-type transcriptional regulator HdfR	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 55186.61 Da
• Isoelectric Point: 8.6038

>NTDB_id=1166999 AB2L98_RS24870 WP_004181640.1 5127006..5128526(+) (comM) [Klebsiella pneumoniae strain Zagreb046 isolate Zagreb046]
MSLAIVYTRAALGIEAPLITVEVHLSNGLPGLTMVGLPETTVKEARDRVRSALINSGYAFPAKKITINLAPADLPKEGGR
YDLPIALALLVASEQLNTTRLNQYEFVGELALTGGLRGVPGAIPSAMEAIKAGRRIVVSSDNAAEVGLIGGSDCLVADHL
QEVCAFLAGQTSLSPPLAEAPARDERYEDLLDVIGQQQGKRALEIVAAGGHNLLLIGPPGTGKTMLASRLPGLLPPLSNQ
EALESAAIQSLVNLHTAKTRWRQRPFRAPHHSASLAAMVGGGSIPVPGEISLAHNGVLFLDELPEFERRVLDALREPIES
GKIHISRSRAKINYPARFQLIAAMNPSPTGHYQGKHNRASPEQTLRYLGRLSGPFLDRFDLSLEIPLPPPGILSQGSQGE
ESSATVRQRVLAARERQMLRQNKLNAHLENREMKNCCRLRREDAVWLEQTLTQLGLSIRAWQRLLKVARTIADLAEVEEI
ERCHLQEALSYRAIDRMLNHLQKMMA

Nucleotide

• Length: 1521 bp

>NTDB_id=1166999 AB2L98_RS24870 WP_004181640.1 5127006..5128526(+) (comM) [Klebsiella pneumoniae strain Zagreb046 isolate Zagreb046]
ATGTCGCTCGCTATCGTCTATACTCGCGCGGCGCTCGGTATCGAAGCGCCATTGATTACCGTTGAGGTTCATCTCAGCAA
CGGTCTTCCTGGTCTAACTATGGTCGGGCTGCCGGAAACCACCGTGAAAGAGGCCCGCGACCGGGTCCGCAGCGCCCTGA
TCAACAGCGGCTACGCTTTTCCTGCGAAGAAGATAACCATTAACCTGGCGCCAGCGGATCTGCCCAAAGAAGGCGGACGA
TACGATCTGCCCATCGCTCTCGCGCTTCTCGTTGCCTCAGAGCAGCTCAACACGACGCGACTGAATCAATATGAGTTTGT
GGGCGAACTCGCCCTTACAGGTGGGTTACGAGGCGTTCCAGGGGCGATCCCCAGCGCAATGGAGGCCATCAAAGCCGGCC
GGCGCATTGTCGTCTCCTCTGACAATGCGGCGGAGGTCGGCCTGATCGGCGGCAGCGATTGTCTGGTCGCCGACCATCTG
CAGGAGGTTTGCGCATTTCTTGCGGGGCAGACATCGCTTTCGCCGCCTCTCGCCGAGGCGCCTGCTCGGGATGAACGCTA
CGAAGATCTGCTCGATGTTATCGGCCAGCAGCAGGGCAAACGAGCGCTGGAGATTGTGGCCGCCGGTGGTCACAATCTGC
TCCTGATAGGCCCGCCCGGGACCGGGAAAACCATGCTAGCCAGCCGACTCCCCGGTCTCCTGCCGCCATTAAGCAATCAG
GAAGCGCTGGAGAGCGCGGCCATACAGAGTCTGGTCAACCTCCACACCGCAAAGACGCGGTGGCGTCAGAGGCCGTTCCG
CGCCCCCCACCATAGCGCCTCGCTGGCAGCGATGGTGGGCGGCGGCTCGATACCGGTCCCCGGTGAGATTTCCCTGGCCC
ATAATGGCGTGCTGTTTCTTGATGAACTGCCGGAGTTTGAGCGGCGGGTACTGGATGCGCTACGCGAACCCATTGAGTCA
GGCAAGATCCACATATCACGCTCGCGCGCCAAAATTAATTATCCGGCGCGCTTTCAGCTTATTGCAGCGATGAATCCAAG
CCCGACAGGACATTATCAGGGTAAACATAATCGTGCATCGCCGGAGCAGACATTGCGCTACCTTGGACGCCTGTCAGGCC
CCTTCCTCGACCGCTTCGATCTTTCCTTAGAGATCCCATTGCCGCCGCCAGGAATACTGAGTCAGGGCTCGCAGGGCGAA
GAATCGAGCGCAACGGTCCGGCAGCGGGTGCTGGCGGCGCGTGAACGACAAATGCTCAGGCAAAATAAACTCAATGCCCA
TCTTGAGAATCGTGAAATGAAGAACTGCTGTCGCTTAAGGCGGGAGGATGCTGTCTGGCTGGAACAGACGCTAACGCAGC
TGGGGCTTTCTATTCGCGCCTGGCAGCGTCTGTTAAAGGTTGCGAGAACCATTGCCGATCTGGCAGAGGTTGAAGAGATT
GAACGCTGTCATTTGCAGGAGGCGCTCAGCTATCGGGCAATTGATCGGATGCTCAACCATCTGCAGAAAATGATGGCGTA
A

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-386)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

3D structure

• AlphaFold DB: A0A0C7KD86

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	60.078	100	0.607
comM	Glaesserella parasuis strain SC1401	59.725	100	0.601
comM	Vibrio cholerae strain A1552	60.04	99.407	0.597
comM	Vibrio campbellii strain DS40M4	59.524	99.605	0.593
comM	Legionella pneumophila str. Paris	50.201	98.419	0.494
comM	Legionella pneumophila strain ERS1305867	50.201	98.419	0.494
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.685	100	0.449