Detailed information NTG1166395

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: AB3230_RS01795
• Genome accession: NZ_OZ061611
• Coordinates: 378714..380864 (+)
• Length: 716 a.a.
• NCBI ID: WP_260196363.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum isolate Lactiplantibacillus plantarum CIRM-BIA2453
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 373714..385864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3230_RS01765	-	374150..375322 (+)	1173	WP_349612526.1	GHKL domain-containing protein	-
AB3230_RS01770	-	375323..376066 (+)	744	WP_021356665.1	response regulator transcription factor	-
AB3230_RS01775	-	376185..376928 (+)	744	WP_061871499.1	response regulator transcription factor	-
AB3230_RS01780	-	377222..377995 (-)	774	WP_021356666.1	CPBP family intramembrane glutamic endopeptidase	-
AB3230_RS01785	plnF	378094..378252 (-)	159	WP_021356667.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
AB3230_RS01790	plnE	378277..378447 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
AB3230_RS01795	comA	378714..380864 (+)	2151	WP_260196363.1	peptide cleavage/export ABC transporter	Regulator
AB3230_RS01800	-	380880..382256 (+)	1377	WP_061871498.1	HlyD family secretion protein	-
AB3230_RS01805	-	382491..383036 (+)	546	WP_003641989.1	CPBP family intramembrane glutamic endopeptidase	-
AB3230_RS01810	-	383103..383771 (+)	669	WP_061871497.1	CPBP family intramembrane glutamic endopeptidase	-
AB3230_RS01815	-	383858..384538 (+)	681	WP_003641991.1	CPBP family intramembrane glutamic endopeptidase	-
AB3230_RS01820	-	384632..385318 (+)	687	WP_003641992.1	CPBP family intramembrane glutamic endopeptidase	-
AB3230_RS01825	-	385456..385659 (+)	204	WP_003641993.1	hypothetical protein	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79964.72 Da
• Isoelectric Point: 6.6531

>NTDB_id=1166395 AB3230_RS01795 WP_260196363.1 378714..380864(+) (comA) [Lactiplantibacillus plantarum isolate Lactiplantibacillus plantarum CIRM-BIA2453]
MHWRNYVAQVDEMDCGVAALAMILKNYGLTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFEVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVGIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=1166395 AB3230_RS01795 WP_260196363.1 378714..380864(+) (comA) [Lactiplantibacillus plantarum isolate Lactiplantibacillus plantarum CIRM-BIA2453]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTTGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGAGGTACAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACACATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGGCATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCGAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAGAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAATGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATTGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• ABC transporter (ABC_tran) (498-648)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.766	99.581	0.585
comA	Streptococcus pneumoniae Rx1	58.485	99.581	0.582
comA	Streptococcus pneumoniae D39	58.485	99.581	0.582
comA	Streptococcus pneumoniae R6	58.485	99.581	0.582
comA	Streptococcus pneumoniae TIGR4	58.345	99.581	0.581
comA	Streptococcus mitis SK321	58.205	99.581	0.58
comA	Streptococcus gordonii str. Challis substr. CH1	56.964	100	0.571
comA/nlmT	Streptococcus mutans UA159	54.457	100	0.546