Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | VOI39_RS23115 | Genome accession | NZ_OY979117 |
| Coordinates | 3207963..3208208 (-) | Length | 81 a.a. |
| NCBI ID | WP_410454608.1 | Uniprot ID | - |
| Organism | Providencia stuartii strain PS13962019BGR isolate PS13962019 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3202963..3213208
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VOI39_RS14790 (PSTU1396_15080) | cmoM | 3203196..3203984 (-) | 789 | WP_004918152.1 | tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM | - |
| VOI39_RS14795 (PSTU1396_15090) | elyC | 3204389..3205216 (+) | 828 | WP_141173479.1 | envelope biogenesis factor ElyC | - |
| VOI39_RS14800 (PSTU1396_15095) | kdsB | 3205288..3206031 (-) | 744 | WP_141173480.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| VOI39_RS14805 (PSTU1396_15100) | - | 3206037..3206216 (-) | 180 | WP_004918148.1 | Trm112 family protein | - |
| VOI39_RS14810 (PSTU1396_15105) | - | 3206362..3206577 (-) | 216 | WP_004918147.1 | cold-shock protein | - |
| VOI39_RS14815 (PSTU1396_15110) | lpxK | 3206968..3207966 (-) | 999 | WP_061064217.1 | tetraacyldisaccharide 4'-kinase | - |
| VOI39_RS23115 (PSTU1396_15115) | rcrQ | 3207963..3208208 (-) | 246 | WP_410454608.1 | hypothetical protein | Regulator |
| VOI39_RS14820 (PSTU1396_15120) | msbA | 3208205..3209707 (-) | 1503 | WP_410454610.1 | lipid A ABC transporter ATP-binding protein/permease MsbA | - |
| VOI39_RS14825 (PSTU1396_15125) | - | 3209743..3212076 (-) | 2334 | WP_141173481.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| VOI39_RS14830 (PSTU1396_15130) | ihfB | 3212688..3212975 (-) | 288 | WP_004918141.1 | integration host factor subunit beta | - |
Sequence
Protein
Download Length: 81 a.a. Molecular weight: 8996.17 Da Isoelectric Point: 4.7724
>NTDB_id=1162449 VOI39_RS23115 WP_410454608.1 3207963..3208208(-) (rcrQ) [Providencia stuartii strain PS13962019BGR isolate PS13962019]
MILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIENADEILVVQDGRIIERGNHKALLALEGAYAQLHKIQFS
Q
MILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIENADEILVVQDGRIIERGNHKALLALEGAYAQLHKIQFS
Q
Nucleotide
Download Length: 246 bp
>NTDB_id=1162449 VOI39_RS23115 WP_410454608.1 3207963..3208208(-) (rcrQ) [Providencia stuartii strain PS13962019BGR isolate PS13962019]
TTGATCCTAGATGAAGCAACGTCTGCATTGGATACTGAATCAGAAAGAGCTATTCAAGCAGCACTGGACGAACTGCAAAA
AAATAGAACGTCTCTTGTGATTGCTCACCGTTTATCAACTATTGAAAATGCGGATGAAATTTTAGTTGTTCAAGATGGTC
GCATTATCGAACGTGGCAACCATAAAGCGTTATTAGCGCTAGAGGGGGCCTATGCTCAACTACATAAAATACAGTTTAGC
CAATGA
TTGATCCTAGATGAAGCAACGTCTGCATTGGATACTGAATCAGAAAGAGCTATTCAAGCAGCACTGGACGAACTGCAAAA
AAATAGAACGTCTCTTGTGATTGCTCACCGTTTATCAACTATTGAAAATGCGGATGAAATTTTAGTTGTTCAAGATGGTC
GCATTATCGAACGTGGCAACCATAAAGCGTTATTAGCGCTAGAGGGGGCCTATGCTCAACTACATAAAATACAGTTTAGC
CAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
59.259 |
100 |
0.593 |
| comA | Streptococcus mitis NCTC 12261 |
47.297 |
91.358 |
0.432 |
| comA | Streptococcus pneumoniae TIGR4 |
45.946 |
91.358 |
0.42 |
| comA | Streptococcus pneumoniae Rx1 |
45.946 |
91.358 |
0.42 |
| comA | Streptococcus pneumoniae D39 |
45.946 |
91.358 |
0.42 |
| comA | Streptococcus pneumoniae R6 |
45.946 |
91.358 |
0.42 |
| comA | Streptococcus mitis SK321 |
45.946 |
91.358 |
0.42 |
| rcrP | Streptococcus mutans UA159 |
41.975 |
100 |
0.42 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
44 |
92.593 |
0.407 |
| comA/nlmT | Streptococcus mutans UA159 |
44 |
92.593 |
0.407 |