Detailed information NTG1162091

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACLMBQ_RS19550
• Genome accession: NZ_OY829390
• Coordinates: 4254872..4255936 (+)
• Length: 354 a.a.
• NCBI ID: WP_247844884.1
• Uniprot ID: -
• Organism: MAG: Marinobacter alexandrii isolate 78648b50-2abc-418f-b92f-8dc6f39ea282
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4249872..4260936

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLMBQ_RS19535 (U5725_RS19535)	rpmE	4250415..4250639 (+)	225	WP_138441912.1	50S ribosomal protein L31	-
ACLMBQ_RS19540 (U5725_RS19540)	-	4250859..4252124 (+)	1266	WP_138441913.1	malic enzyme-like NAD(P)-binding protein	-
ACLMBQ_RS19545 (U5725_RS19545)	-	4252209..4254677 (-)	2469	WP_322002470.1	penicillin-binding protein 1A	-
ACLMBQ_RS19550 (U5725_RS19550)	pilM	4254872..4255936 (+)	1065	WP_247844884.1	pilus assembly protein PilM	Machinery gene
ACLMBQ_RS19555 (U5725_RS19555)	-	4255936..4256502 (+)	567	WP_247844885.1	PilN domain-containing protein	-
ACLMBQ_RS19560 (U5725_RS19560)	-	4256499..4257110 (+)	612	WP_247844886.1	type 4a pilus biogenesis protein PilO	-
ACLMBQ_RS19565 (U5725_RS19565)	-	4257113..4257661 (+)	549	WP_322003955.1	pilus assembly protein PilP	-
ACLMBQ_RS19570 (U5725_RS19570)	pilQ	4257726..4259798 (+)	2073	WP_247844890.1	type IV pilus secretin PilQ	Machinery gene
ACLMBQ_RS19575 (U5725_RS19575)	aroK	4259937..4260503 (+)	567	WP_138441920.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37886.96 Da
• Isoelectric Point: 4.1452

>NTDB_id=1162091 ACLMBQ_RS19550 WP_247844884.1 4254872..4255936(+) (pilM) [MAG: Marinobacter alexandrii isolate 78648b50-2abc-418f-b92f-8dc6f39ea282]
MFGLFGKKSSAVLGVDVSSSSVKLLELSKQGGRIKVESYAVEPLPANAVVEKNITDVEAVGEVLKRVASKSRTGVKQVAV
AVSGSAVITKLIQMDGGLNEFEMEDQIALEADQYIPYPLDEVAIDFEVQGPSENNPDQVDVLLAACRKENVDIREDALEI
ASLSAKIVDVEAYSLERAYSLIEPQLDSQGEELVVAIVDVGATMTTLSVLADGKTAYTREQIFGGKQLTEEIQRRYGLSL
EEAGLAKKQGGLPDDYESEVLMPFREAVVQQVARALQFFFGASQYNAVDYVVLAGGTASIQGLTEMVEEKTGTPTLVANP
FADMAVGSRVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1162091 ACLMBQ_RS19550 WP_247844884.1 4254872..4255936(+) (pilM) [MAG: Marinobacter alexandrii isolate 78648b50-2abc-418f-b92f-8dc6f39ea282]
GTGTTCGGATTGTTCGGAAAGAAATCCAGTGCAGTGCTGGGCGTGGACGTCAGCTCCAGTTCGGTCAAACTTCTGGAGCT
GTCAAAGCAGGGCGGCCGCATAAAGGTCGAAAGCTACGCGGTGGAGCCATTGCCGGCCAACGCCGTTGTCGAGAAAAATA
TCACGGACGTCGAGGCAGTGGGTGAGGTGCTCAAGCGCGTCGCCTCGAAATCGCGCACGGGTGTGAAACAGGTTGCAGTG
GCTGTCTCTGGCTCTGCCGTGATCACCAAACTCATCCAGATGGATGGCGGCCTCAACGAATTTGAAATGGAAGATCAGAT
AGCCCTTGAGGCGGATCAATACATCCCATACCCGCTGGATGAAGTTGCCATCGACTTTGAGGTTCAGGGCCCTTCGGAGA
ACAATCCGGATCAGGTTGATGTGCTTCTGGCTGCATGCAGAAAGGAAAACGTCGACATACGTGAGGACGCGCTTGAGATT
GCCTCGCTGTCAGCAAAGATTGTCGATGTCGAAGCCTACTCCCTTGAGCGTGCCTACTCCCTGATTGAACCGCAGCTTGA
TTCCCAGGGCGAAGAACTGGTGGTGGCCATTGTTGATGTCGGTGCCACTATGACAACACTTAGCGTTCTCGCCGATGGCA
AGACCGCGTATACCCGCGAACAGATCTTTGGCGGTAAACAGCTCACCGAAGAAATTCAGCGTCGGTATGGGCTTTCGCTC
GAAGAGGCCGGCCTCGCCAAGAAGCAGGGCGGCTTGCCCGATGATTATGAATCCGAAGTGCTGATGCCATTTCGCGAGGC
CGTGGTGCAGCAAGTAGCGCGGGCCTTGCAGTTCTTCTTTGGCGCCAGCCAATACAACGCAGTCGACTATGTGGTTCTGG
CAGGTGGCACTGCCTCGATACAGGGACTGACAGAAATGGTCGAGGAAAAAACAGGAACGCCCACTCTGGTCGCCAATCCG
TTTGCCGACATGGCAGTAGGATCTCGGGTGAATGCGTCTGCACTGAGCAACGATGCCCCCTCGCTGATGATCGCCTGTGG
CCTGGCGATGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	53.39	100	0.534
comM	Acinetobacter nosocomialis M2	53.39	100	0.534
comM	Acinetobacter baylyi ADP1	50.282	100	0.503
pilM	Legionella pneumophila strain ERS1305867	44.915	100	0.449