Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | ACI6PA_RS07710 | Genome accession | NZ_OY724190 |
| Coordinates | 1579296..1579571 (-) | Length | 91 a.a. |
| NCBI ID | WP_057866609.1 | Uniprot ID | A0A837RK71 |
| Organism | Companilactobacillus crustorum strain IMDO BLLM15 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1574296..1584571
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI6PA_RS07685 (CCBLLM15_CCBLLM15_01555) | - | 1575678..1576874 (-) | 1197 | WP_057866603.1 | acetate/propionate family kinase | - |
| ACI6PA_RS07690 (CCBLLM15_CCBLLM15_01556) | - | 1576885..1577898 (-) | 1014 | WP_057866604.1 | class I SAM-dependent methyltransferase | - |
| ACI6PA_RS07695 (CCBLLM15_CCBLLM15_01558) | - | 1578164..1578613 (-) | 450 | WP_057866606.1 | competence type IV pilus minor pilin ComGF | - |
| ACI6PA_RS07700 (CCBLLM15_CCBLLM15_01559) | - | 1578585..1578872 (-) | 288 | WP_057866607.1 | hypothetical protein | - |
| ACI6PA_RS07705 (CCBLLM15_CCBLLM15_01560) | - | 1578856..1579299 (-) | 444 | WP_057866608.1 | type II secretion system protein | - |
| ACI6PA_RS07710 (CCBLLM15_CCBLLM15_01561) | comGC | 1579296..1579571 (-) | 276 | WP_057866609.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACI6PA_RS07715 (CCBLLM15_CCBLLM15_01562) | - | 1579571..1580563 (-) | 993 | WP_235525252.1 | type II secretion system F family protein | - |
| ACI6PA_RS07720 (CCBLLM15_CCBLLM15_01563) | comGA | 1580550..1581518 (-) | 969 | WP_057866611.1 | competence type IV pilus ATPase ComGA | - |
| ACI6PA_RS07725 (CCBLLM15_CCBLLM15_01564) | - | 1581598..1582335 (-) | 738 | WP_057866612.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
Sequence
Protein
Download Length: 91 a.a. Molecular weight: 10604.53 Da Isoelectric Point: 8.4500
>NTDB_id=1160442 ACI6PA_RS07710 WP_057866609.1 1579296..1579571(-) (comGC) [Companilactobacillus crustorum strain IMDO BLLM15]
MKKIHKAFTLIEMVIVLFIISLLLLIMIPNLVAQKNHAEDRSQEAFITTIKTQKELYSDNEGKIPSLGELEKEKYITQKQ
YEKAQKIDELK
MKKIHKAFTLIEMVIVLFIISLLLLIMIPNLVAQKNHAEDRSQEAFITTIKTQKELYSDNEGKIPSLGELEKEKYITQKQ
YEKAQKIDELK
Nucleotide
Download Length: 276 bp
>NTDB_id=1160442 ACI6PA_RS07710 WP_057866609.1 1579296..1579571(-) (comGC) [Companilactobacillus crustorum strain IMDO BLLM15]
ATGAAAAAAATTCACAAGGCTTTTACTTTAATTGAGATGGTAATTGTACTTTTTATTATTTCACTGTTGTTACTAATTAT
GATCCCTAATTTGGTGGCTCAAAAAAATCATGCTGAAGATAGATCCCAAGAAGCATTTATTACAACCATCAAAACTCAGA
AGGAACTATATTCTGATAACGAAGGAAAAATACCTTCATTGGGTGAATTAGAAAAAGAAAAATATATAACTCAAAAACAA
TATGAAAAAGCTCAAAAAATTGATGAACTAAAATGA
ATGAAAAAAATTCACAAGGCTTTTACTTTAATTGAGATGGTAATTGTACTTTTTATTATTTCACTGTTGTTACTAATTAT
GATCCCTAATTTGGTGGCTCAAAAAAATCATGCTGAAGATAGATCCCAAGAAGCATTTATTACAACCATCAAAACTCAGA
AGGAACTATATTCTGATAACGAAGGAAAAATACCTTCATTGGGTGAATTAGAAAAAGAAAAATATATAACTCAAAAACAA
TATGAAAAAGCTCAAAAAATTGATGAACTAAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Latilactobacillus sakei subsp. sakei 23K |
54.651 |
94.505 |
0.516 |
| comYC | Streptococcus mutans UA140 |
44.048 |
92.308 |
0.407 |
| comYC | Streptococcus mutans UA159 |
44.048 |
92.308 |
0.407 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
41.667 |
92.308 |
0.385 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
43.21 |
89.011 |
0.385 |
| comGC/cglC | Streptococcus mitis SK321 |
44 |
82.418 |
0.363 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
44 |
82.418 |
0.363 |