Detailed information NTG1158383

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: QM512_RS01275
• Genome accession: NZ_OX443569
• Coordinates: 285105..287264 (+)
• Length: 719 a.a.
• NCBI ID: WP_282805751.1
• Uniprot ID: -
• Organism: Lactobacillus isalae strain AMBV1719
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 280105..292264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QM512_RS01250	-	280910..282112 (-)	1203	WP_282805748.1	glycosyltransferase	-
QM512_RS01255	-	282264..282446 (-)	183	WP_270516135.1	hypothetical protein	-
QM512_RS01260	-	282821..282967 (+)	147	WP_282805749.1	lactacin F inducer peptide precursor	-
QM512_RS01265	-	283214..284287 (+)	1074	WP_282805750.1	sensor histidine kinase	-
QM512_RS01270	-	284295..285092 (+)	798	WP_094517356.1	LytTR family DNA-binding domain-containing protein	-
QM512_RS01275	comA	285105..287264 (+)	2160	WP_282805751.1	peptide cleavage/export ABC transporter	Regulator
QM512_RS01280	-	287275..287868 (+)	594	WP_011161710.1	HlyD family efflux transporter periplasmic adaptor subunit	-
QM512_RS01285	-	287995..288222 (+)	228	WP_014567249.1	bacteriocin class II family protein	-
QM512_RS01290	-	288233..288421 (+)	189	WP_011161712.1	Blp family class II bacteriocin	-
QM512_RS01295	-	288508..288882 (+)	375	WP_011161713.1	hypothetical protein	-
QM512_RS01300	-	289242..290289 (+)	1048	Protein_251	IS30-like element ISLjo1 family transposase	-
QM512_RS01305	-	290323..291273 (+)	951	Protein_252	ATP-binding cassette domain-containing protein	-
QM512_RS01310	-	291284..291877 (+)	594	WP_282805753.1	hypothetical protein	-
QM512_RS01315	-	291922..292206 (+)	285	WP_282805754.1	bacteriocin immunity protein	-

Sequence

Protein

• Length: 719 a.a.
• Molecular weight: 81230.57 Da
• Isoelectric Point: 7.4713

>NTDB_id=1158383 QM512_RS01275 WP_282805751.1 285105..287264(+) (comA) [Lactobacillus isalae strain AMBV1719]
MLLKYKSVYVPQVDEMDCGVACLAMILKQYHSRVSLAHLRHEARTNLEGTTAWGLVKTAQKLNFKTEAVKADMSLFNENS
IQYPFIAHVLKQGELLHYYVVLKNAKNYLVIADPDPSIGVVKMPKDRFAQEWTGIALFMVPNEDFEPIKEKKNNLWSLFP
YMFKQKRLMINIILAALLMTIISICSSYFVQGIIDTYIPDGTYQTLSILAVGLLIAYIFNSIFSYGQNFLLNVLGQRLSI
DLNLQYIRHIFELPMEFFVTRRTGEITSRFSDASRIIDALASTVISLFLDLSIVIVMGLVLAAQNMTLFGITLLALPVYA
VVILGFTKKFEKLNNEQMESNAVLSSSVIEDIQGIETIKALNSENTRYRRIDSQFVDYLKKSFKYSKTESLQTALKTFIQ
LSLNVIILWVGAKVVMQGQLSIGQLMTFNALLAYFIDPLQNIINLQPRLQSASVAQNRLNEVYQVKSEFNQKTAIEDCKL
LEGNIEYKNVDYRYGYGADVLKDINLKINQGEKLTIVGMSGSGKSTMVKLLVDFFSPSKGQVILNGHATSEINKHSLRSY
VNYVPQTPYIFSGTVRENLLLGCRPDITEEDVIEACQIAEIDQEIANLPLQFETKLDENAKILSGGQKQRLTIARALLSP
AKVFIFDEVTSGLDTITEKRVIDNLMKLKDKTIIFIAHRLAIAERADKVVVIDRGQIVEEGSHSELMNMHGFYYDLVKG

Nucleotide

• Length: 2160 bp

>NTDB_id=1158383 QM512_RS01275 WP_282805751.1 285105..287264(+) (comA) [Lactobacillus isalae strain AMBV1719]
ATGTTATTAAAATATAAATCCGTATACGTGCCACAAGTCGATGAGATGGATTGCGGGGTTGCTTGTCTAGCAATGATTCT
AAAACAATATCATTCTCGTGTATCCTTAGCACATTTACGGCATGAAGCTCGCACTAATCTTGAAGGCACCACAGCTTGGG
GATTAGTGAAGACAGCGCAAAAATTAAATTTCAAAACTGAAGCCGTAAAAGCTGACATGTCTTTGTTTAATGAGAATAGT
ATTCAATATCCTTTTATTGCACATGTTCTTAAGCAAGGGGAATTACTTCATTATTATGTAGTTCTTAAAAATGCTAAAAA
CTATTTAGTAATTGCGGATCCCGATCCATCAATTGGTGTGGTAAAGATGCCTAAAGATAGGTTCGCTCAAGAATGGACAG
GGATTGCACTCTTTATGGTTCCAAATGAAGATTTTGAACCAATTAAAGAAAAGAAAAATAACCTATGGTCTCTCTTTCCA
TATATGTTTAAACAAAAGCGGCTGATGATTAACATCATTTTAGCCGCTTTATTAATGACCATAATTAGTATCTGTAGTTC
ATACTTTGTTCAAGGAATAATTGATACTTATATTCCAGATGGAACTTATCAGACTCTTTCAATTTTAGCTGTTGGATTAT
TAATTGCTTATATTTTTAATTCAATCTTTTCTTATGGACAGAATTTTTTATTAAATGTTTTAGGTCAAAGATTAAGTATT
GATTTAAATCTTCAATATATTAGACATATTTTTGAATTACCAATGGAATTCTTTGTGACTAGAAGAACTGGTGAAATAAC
CTCACGTTTCTCTGATGCAAGTAGAATTATTGATGCTCTAGCAAGTACTGTTATTTCGCTCTTCTTAGACCTCTCAATTG
TGATTGTGATGGGATTAGTCTTAGCAGCACAAAATATGACATTATTTGGGATTACATTATTAGCTTTACCAGTATATGCA
GTTGTAATTCTAGGCTTTACTAAGAAGTTCGAAAAATTAAACAATGAACAAATGGAAAGTAACGCTGTTTTGAGTTCCTC
AGTTATTGAAGATATTCAAGGAATTGAAACTATTAAAGCTTTAAATAGTGAGAATACAAGATATAGAAGAATTGATAGTC
AGTTTGTAGATTACTTAAAAAAATCTTTTAAATACAGCAAAACTGAGAGCTTGCAGACAGCACTCAAGACATTTATTCAA
TTATCTCTTAATGTAATTATTCTTTGGGTTGGTGCAAAAGTTGTAATGCAAGGACAATTGAGCATTGGTCAGTTGATGAC
TTTTAATGCGTTGCTGGCATATTTTATTGATCCACTGCAAAATATTATTAATCTGCAACCGCGACTTCAATCAGCTAGTG
TTGCTCAAAATCGATTGAATGAGGTCTATCAAGTAAAAAGTGAATTCAATCAGAAGACTGCTATTGAAGATTGTAAGCTC
CTAGAAGGAAATATTGAATATAAGAATGTGGATTATCGCTATGGTTATGGTGCAGATGTCTTAAAAGATATTAATCTAAA
AATTAACCAGGGCGAAAAATTAACGATTGTTGGAATGAGTGGATCTGGAAAATCAACAATGGTTAAGTTGTTAGTAGATT
TCTTTTCGCCAAGTAAGGGTCAAGTCATTTTAAATGGCCATGCAACAAGTGAGATTAATAAGCATAGCTTGCGATCATAT
GTGAATTATGTACCTCAAACCCCATATATCTTTTCTGGAACAGTTAGAGAGAATTTGTTGTTAGGTTGTAGGCCAGATAT
CACTGAAGAAGATGTAATAGAGGCTTGTCAGATTGCTGAGATTGACCAAGAAATAGCTAATCTACCTTTGCAATTTGAAA
CAAAATTAGATGAAAATGCAAAAATTCTATCTGGTGGACAAAAACAAAGGTTAACAATTGCTCGGGCATTATTATCTCCT
GCAAAGGTATTTATCTTTGATGAAGTAACAAGTGGCTTAGATACAATTACTGAGAAGAGAGTAATTGATAATTTGATGAA
GCTCAAAGATAAGACAATTATTTTTATCGCACACCGTCTGGCAATTGCGGAACGAGCAGATAAGGTTGTTGTAATTGATC
GTGGCCAGATAGTTGAAGAAGGCAGTCACAGCGAATTGATGAATATGCATGGCTTTTATTATGACTTAGTGAAGGGATAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (501-651)

• ABC transporter transmembrane region (ABC_membrane) (169-439)

• Peptidase C39 family (Peptidase_C39) (7-143)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	57.584	99.026	0.57
comA	Streptococcus mitis SK321	57.303	99.026	0.567
comA	Streptococcus pneumoniae Rx1	57.163	99.026	0.566
comA	Streptococcus pneumoniae D39	57.163	99.026	0.566
comA	Streptococcus pneumoniae R6	57.163	99.026	0.566
comA	Streptococcus pneumoniae TIGR4	57.022	99.026	0.565
comA	Streptococcus gordonii str. Challis substr. CH1	56.32	99.026	0.558
comA/nlmT	Streptococcus mutans UA159	53.607	98.331	0.527