Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   OPR57_RS04730 Genome accession   NZ_OX366362
Coordinates   899609..900292 (-) Length   227 a.a.
NCBI ID   WP_265035996.1    Uniprot ID   -
Organism   Wolbachia endosymbiont (group A) of Anomoia purmunda isolate 26586     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 894609..905292
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPR57_RS04700 - 895542..896330 (-) 789 WP_265035988.1 succinate dehydrogenase iron-sulfur subunit -
  OPR57_RS04705 ybeY 896417..896869 (-) 453 WP_265037559.1 rRNA maturation RNase YbeY -
  OPR57_RS08070 - 896894..897025 (+) 132 WP_259348783.1 hypothetical protein -
  OPR57_RS04715 - 897233..897631 (-) 399 WP_265035990.1 EVE domain-containing protein -
  OPR57_RS04720 ftsZ 897631..898827 (-) 1197 WP_265035993.1 cell division protein FtsZ -
  OPR57_RS04725 - 899072..899524 (-) 453 WP_265035995.1 hypothetical protein -
  OPR57_RS04730 comM 899609..900292 (-) 684 WP_265035996.1 ATP-binding protein Machinery gene
  OPR57_RS04735 - 900320..901131 (-) 812 Protein_911 IS5 family transposase -
  OPR57_RS04740 - 901473..902492 (+) 1020 WP_265037507.1 IS110 family transposase -
  OPR57_RS04745 - 902524..902790 (+) 267 WP_265035997.1 phage tail tape measure protein -
  OPR57_RS04750 - 902909..903856 (+) 948 WP_265035888.1 IS110 family transposase -
  OPR57_RS04755 - 904057..904719 (+) 663 Protein_915 integrase core domain-containing protein -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 25401.29 Da        Isoelectric Point: 8.6853

>NTDB_id=1156033 OPR57_RS04730 WP_265035996.1 899609..900292(-) (comM) [Wolbachia endosymbiont (group A) of Anomoia purmunda isolate 26586]
MPAMIGGGKNAKPGEITMAHNGVLFLDELPEFPRLVLDSLRQPLEDRKVTVARANAHITYPANFQLIAAMNPCRCGYLGD
ASRSCNKAPKCGTDYKNKISGPLLDRIDICIEMPNVSILSPEISVEGESTKIIRERVIAARKIQTERYSELNIRCNSEVS
GESFNKFTEPDQAGLELLKYVLKENYISNRGYTRVLKVARTIADLAKSEEVKRAHIAEALNYRIRVY

Nucleotide


Download         Length: 684 bp        

>NTDB_id=1156033 OPR57_RS04730 WP_265035996.1 899609..900292(-) (comM) [Wolbachia endosymbiont (group A) of Anomoia purmunda isolate 26586]
ATGCCAGCAATGATAGGAGGAGGAAAGAATGCAAAACCTGGAGAAATTACCATGGCTCACAATGGCGTGTTATTTCTTGA
TGAGCTACCTGAATTTCCAAGACTCGTGCTTGATTCTCTGCGCCAACCACTTGAAGATAGAAAAGTTACCGTTGCAAGGG
CAAACGCTCACATTACTTATCCAGCCAATTTTCAACTTATAGCTGCAATGAACCCTTGCAGGTGCGGTTATTTAGGTGAT
GCAAGCAGATCGTGCAACAAAGCTCCAAAGTGTGGCACAGATTACAAAAACAAAATATCAGGACCATTGCTTGATAGAAT
AGACATATGCATTGAAATGCCAAACGTTAGCATACTCTCTCCTGAAATCTCTGTGGAGGGAGAAAGTACTAAGATCATAA
GAGAAAGAGTAATAGCAGCGAGAAAAATTCAAACTGAGCGTTATAGTGAATTAAATATTCGTTGCAATTCAGAAGTAAGC
GGTGAATCATTTAATAAATTTACTGAACCAGATCAGGCAGGGTTAGAATTGCTAAAATACGTACTGAAAGAAAATTATAT
TTCCAATCGAGGCTACACACGCGTATTAAAAGTTGCAAGAACTATTGCAGATCTTGCAAAAAGTGAAGAAGTAAAAAGAG
CACACATTGCTGAAGCGCTGAATTACAGAATAAGGGTATATTAA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(2-117)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(127-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Haemophilus influenzae Rd KW20

46.983

100

0.48
  comM Glaesserella parasuis strain SC1401

46.903

99.559

0.467
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

47.964

97.357

0.467
  comM Vibrio campbellii strain DS40M4

44.053

100

0.441
  comM Legionella pneumophila str. Paris

43.421

100

0.436
  comM Legionella pneumophila strain ERS1305867

43.421

100

0.436
  comM Vibrio cholerae strain A1552

41.667

100

0.419

Multiple sequence alignment