Detailed information NTG1152572

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: NBW44_RS00365
• Genome accession: NZ_OW724079
• Coordinates: 56175..57101 (+)
• Length: 308 a.a.
• NCBI ID: WP_075566217.1
• Uniprot ID: -
• Organism: Streptococcus sp. Marseille-Q3533
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 51175..62101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NBW44_RS00355	amiA	52631..54613 (+)	1983	WP_250306744.1	peptide ABC transporter substrate-binding protein	Regulator
NBW44_RS00360	amiC	54679..56175 (+)	1497	WP_250306745.1	ABC transporter permease	Regulator
NBW44_RS00365	amiD	56175..57101 (+)	927	WP_075566217.1	oligopeptide ABC transporter permease OppC	Regulator
NBW44_RS00370	amiE	57110..58177 (+)	1068	WP_075566219.1	ABC transporter ATP-binding protein	Regulator
NBW44_RS00375	amiF	58188..59114 (+)	927	WP_075566225.1	ATP-binding cassette domain-containing protein	Regulator
NBW44_RS00380	-	59266..59466 (+)	201	WP_250306746.1	mechanosensitive ion channel protein MscL	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34578.40 Da
• Isoelectric Point: 9.3079

>NTDB_id=1152572 NBW44_RS00365 WP_075566217.1 56175..57101(+) (amiD) [Streptococcus sp. Marseille-Q3533]
MSTISNDKFQFVKRDDYASEVIDAPAYSYWGSVFRQFLKKKSTVIMLGILISIVLMSFIYPIFSDFDFNDVSKVNDFSAR
FIKPNAEHWFGTDSNGKSLFDGVWFGARNSILISVIATTINLVIGVIVGGIWGISKSVDRIMMEVYNVINNIPSLLIVIV
LTYSIGAGFWNLIFAMSVTTWINVAFSIRIQMLRYRDLEYNLASRTLGTPSYKIIVKNIMPQLVSVIVTSLTQMLPAFIS
YEAFLSFFGLGLPITVPSLGRLISDYSQNVTTNAYLFWIPLTTLVLVSLSLFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=1152572 NBW44_RS00365 WP_075566217.1 56175..57101(+) (amiD) [Streptococcus sp. Marseille-Q3533]
ATGTCTACAATTAGTAATGATAAATTTCAGTTCGTAAAACGTGATGACTATGCCTCTGAAGTAATTGACGCTCCTGCCTA
TTCATACTGGGGTTCTGTCTTTAGACAGTTTTTGAAGAAAAAATCAACAGTAATCATGCTCGGTATTTTGATTTCTATTG
TCTTGATGAGTTTCATCTATCCAATATTTTCTGATTTTGACTTTAATGATGTAAGTAAAGTTAACGACTTTAGTGCTCGT
TTCATTAAGCCAAATGCTGAGCATTGGTTCGGTACAGATAGTAACGGGAAATCACTCTTTGATGGCGTCTGGTTTGGAGC
ACGTAACTCAATCCTGATTTCGGTAATTGCAACTACTATCAACCTTGTTATTGGTGTGATTGTAGGTGGAATCTGGGGTA
TCTCAAAATCAGTTGACCGTATCATGATGGAAGTCTACAACGTTATCAACAATATTCCATCGCTTTTGATCGTTATCGTT
TTGACTTACTCTATCGGAGCAGGTTTCTGGAACTTGATTTTTGCCATGAGTGTAACAACCTGGATTAATGTTGCTTTCTC
AATTCGTATCCAAATGTTACGTTACCGTGATTTGGAGTACAACCTTGCTTCACGAACTTTGGGAACACCAAGTTACAAAA
TTATTGTGAAAAACATTATGCCACAATTGGTATCTGTTATTGTAACGAGTTTGACACAAATGCTTCCAGCATTTATCTCA
TATGAAGCCTTCCTATCATTCTTTGGACTTGGTTTGCCGATTACGGTACCTAGTTTGGGACGTTTGATTTCAGACTATTC
TCAGAACGTAACTACAAATGCCTACCTCTTCTGGATTCCATTGACTACTTTGGTTTTGGTTTCCTTATCACTTTTCATTG
TTGGACAAAACTTAGCCGATGCTAGTGATCCACGTACACATAGATAG

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (123-306)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	79.545	100	0.795
amiD	Streptococcus thermophilus LMG 18311	78.247	100	0.782
amiD	Streptococcus thermophilus LMD-9	78.247	100	0.782