Detailed information NTG1150999

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: KOD61_RS11110
• Genome accession: NZ_OU015430
• Coordinates: 2361289..2362689 (+)
• Length: 466 a.a.
• NCBI ID: WP_215218727.1
• Uniprot ID: -
• Organism: Novilysobacter luteus strain CECT 30171
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2356289..2367689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KOD61_RS11095	-	2356546..2357157 (-)	612	WP_215218724.1	hypothetical protein	-
KOD61_RS11100 (LYB30171_02215)	-	2357154..2358119 (-)	966	WP_215218725.1	hypothetical protein	-
KOD61_RS11105 (LYB30171_02216)	-	2358112..2361105 (-)	2994	WP_215218726.1	type VI secretion system Vgr family protein	-
KOD61_RS11110 (LYB30171_02217)	pilR	2361289..2362689 (+)	1401	WP_215218727.1	sigma-54 dependent transcriptional regulator	Regulator
KOD61_RS13095 (LYB30171_02218)	pilA/pilA1	2362985..2363413 (+)	429	WP_215218728.1	pilin	Machinery gene
KOD61_RS11120 (LYB30171_02219)	pilB	2363569..2365299 (+)	1731	WP_215218729.1	type IV-A pilus assembly ATPase PilB	Machinery gene
KOD61_RS11125 (LYB30171_02220)	pilC	2365559..2366818 (+)	1260	WP_215218730.1	type II secretion system F family protein	Machinery gene

Sequence

Protein

• Length: 466 a.a.
• Molecular weight: 50543.72 Da
• Isoelectric Point: 5.5452

>NTDB_id=1150999 KOD61_RS11110 WP_215218727.1 2361289..2362689(+) (pilR) [Novilysobacter luteus strain CECT 30171]
MSETRSALVIDDERDIRELLVMTLGRMGLRCDTASSLADARNQLARNRYDLCLTDMRLPDGSGIDLIAEITQKFPNTPVA
MITAFGNVEDAVEALKAGAFDFVSKPVELTVLRDLVRHALELNEPHAPAADAVASRLYGESPAMTTLRQTIGKVARSQAP
VYIAGESGVGKELVARTIHAEGGRATGPFVPVNCGAIPSELMESEFFGHKKGSFTGAHADKPGLFQSADGGTLFLDEVAE
LPLAMQVKLLRAIQEKSIRPVGANAEVTVDVRILSATHKDLAPMVADGRFRQDLYYRINVIELRVPPLRERREDLPGLCD
KILTRLSGHLDRPTPRLGDDAIEALQQYAFPGNVRELENILERALALADGDVLGADDLSLPRLTPVPPAAAPQTPQGAAA
ANGIDPRTVDPRDTATSALPSYIEEIERAAIQHALQENRYNKTRTAAALGITFRALRYKLKKLGID

Nucleotide

• Length: 1401 bp

>NTDB_id=1150999 KOD61_RS11110 WP_215218727.1 2361289..2362689(+) (pilR) [Novilysobacter luteus strain CECT 30171]
ATGTCAGAAACCCGCAGTGCACTGGTGATCGACGACGAGCGCGACATTCGCGAGCTGCTCGTAATGACGCTTGGCCGCAT
GGGCCTGCGTTGCGACACCGCATCCAGTCTGGCCGACGCGCGCAACCAGCTTGCGCGCAACCGCTATGACCTGTGCCTGA
CCGACATGCGCCTGCCGGACGGCTCGGGCATCGACCTCATTGCCGAGATCACCCAGAAGTTCCCCAACACGCCGGTCGCG
ATGATCACCGCGTTCGGAAATGTCGAAGACGCGGTCGAGGCGCTGAAGGCGGGCGCGTTCGACTTCGTCTCAAAGCCCGT
CGAGCTGACCGTGCTGCGTGACCTCGTCCGCCACGCGCTGGAGCTCAACGAACCGCATGCGCCCGCGGCCGACGCGGTCG
CTTCGCGCCTGTATGGCGAGTCGCCGGCGATGACCACGCTGCGCCAGACCATTGGCAAGGTGGCCCGCAGCCAGGCACCG
GTGTACATCGCCGGTGAGTCCGGCGTCGGCAAGGAGCTGGTCGCGCGCACCATCCATGCCGAAGGCGGCCGCGCCACCGG
GCCGTTCGTGCCGGTCAACTGCGGCGCGATCCCGTCGGAGCTGATGGAAAGCGAATTCTTCGGCCACAAGAAGGGCAGCT
TCACCGGCGCCCACGCCGATAAGCCGGGCCTGTTCCAGAGCGCCGACGGTGGCACGTTGTTCCTCGACGAGGTCGCCGAG
CTGCCGCTGGCAATGCAGGTCAAGCTGCTGCGTGCCATCCAGGAAAAGTCGATCCGCCCGGTCGGTGCCAACGCCGAAGT
CACCGTGGACGTCCGAATCCTGTCGGCGACCCACAAGGACCTGGCCCCGATGGTGGCCGACGGCCGCTTCCGCCAGGACC
TCTATTACCGCATCAACGTGATCGAGTTGCGCGTGCCGCCGCTGCGCGAGCGCCGCGAAGACCTGCCGGGCCTGTGCGAC
AAGATCCTGACCCGCCTGTCCGGGCACCTCGACCGCCCCACGCCTCGGCTGGGTGACGATGCCATCGAAGCCCTGCAGCA
GTACGCCTTCCCCGGCAACGTGCGCGAGCTGGAGAACATCCTCGAGCGCGCCCTGGCCCTGGCCGACGGCGACGTACTCG
GCGCCGACGACCTGTCGCTGCCGCGACTGACCCCCGTCCCGCCGGCGGCGGCTCCGCAGACGCCGCAAGGTGCCGCGGCC
GCCAATGGCATCGATCCGCGCACGGTCGACCCGCGCGACACCGCTACCAGCGCCCTGCCCTCGTACATCGAGGAGATCGA
GCGCGCCGCCATCCAGCACGCGTTGCAGGAAAACCGTTACAACAAGACCCGCACCGCCGCGGCCCTGGGCATCACCTTCC
GCGCGCTGCGCTACAAGCTCAAGAAGCTCGGGATCGACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

• Response regulator receiver domain (Response_reg) (8-116)

• Sigma-54 interaction domain (Sigma54_activat) (138-303)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.554	99.142	0.62
pilR	Acinetobacter baumannii strain A118	49.036	100	0.491