Detailed information NTG1150873

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KKR00_RS16330
• Genome accession: NZ_OU015340
• Coordinates: 3208069..3209589 (+)
• Length: 506 a.a.
• NCBI ID: WP_000050215.1
• Uniprot ID: A0A3V4SQX5
• Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 3203069..3214589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KKR00_RS16305	ilvE	3204626..3205555 (-)	930	WP_000208528.1	branched-chain-amino-acid transaminase	-
KKR00_RS16310	ilvM	3205573..3205836 (-)	264	WP_000983260.1	acetolactate synthase 2 small subunit	-
KKR00_RS16315	ilvG	3205833..3207479 (-)	1647	WP_001012570.1	acetolactate synthase 2 catalytic subunit	-
KKR00_RS16320	ilvX	3207482..3207532 (-)	51	WP_192930503.1	peptide IlvX	-
KKR00_RS16325	ilvL	3207619..3207717 (-)	99	WP_001311244.1	ilv operon leader peptide	-
KKR00_RS16330	comM	3208069..3209589 (+)	1521	WP_000050215.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KKR00_RS16335	maoP	3209614..3209952 (-)	339	WP_000840996.1	macrodomain Ori organization protein MaoP	-
KKR00_RS16340	hdfR	3210059..3210907 (+)	849	WP_001541181.1	HTH-type transcriptional regulator HdfR	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 55013.21 Da
• Isoelectric Point: 8.4881

>NTDB_id=1150873 KKR00_RS16330 WP_000050215.1 3208069..3209589(+) (comM) [Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944]
MSLAIVHTRAALGVNAPPITIEVHISNGLPGLTMVGLPETTVKEARDRVRSAIINSGYEFPAKKITINLAPADLPKEGGR
YDLPIAVALLAASEQLTASNLEAYELVGELALTGALRGVPGAISSATEAIRAGRNIIVATENAAEVGLISKEGCFIADHL
QTVCAFLEGKHALERPLAQDMASPTATADLRDVIGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRLSGILPPLSNE
EALESAAILSLVNADTVQKRWQQRPFRSPHHSASLTAMVGGGAIPAPGEISLAHNGILFLDELPEFERRTLDALREPIES
GQIHLSRTRAKITYPARFQLIAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSQHASKG
ESSATVKKRVIAAHERQYRRQKKLNARLEGREIQKYCVLHHDDARWLEDTLVHLGLSIRAWQRLLKVARTIADIELADQI
SRQHLQEAVSYRAIDRLLIHLQKLLA

Nucleotide

• Length: 1521 bp

>NTDB_id=1150873 KKR00_RS16330 WP_000050215.1 3208069..3209589(+) (comM) [Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00027944 isolate AUSMDU00027944]
ATGTCACTGGCGATTGTTCATACCCGCGCCGCACTTGGCGTCAATGCGCCGCCTATCACTATAGAGGTGCATATCAGTAA
TGGATTACCGGGATTAACCATGGTTGGCCTACCGGAAACCACGGTAAAAGAGGCGCGTGACCGGGTACGTAGTGCGATTA
TTAATAGCGGATATGAATTTCCGGCTAAAAAAATAACCATTAACCTTGCTCCAGCCGATCTACCGAAAGAGGGTGGAAGG
TATGACCTGCCTATTGCTGTTGCGCTTCTGGCCGCGTCTGAGCAGCTTACAGCGTCGAATCTTGAGGCATATGAGCTGGT
GGGTGAGTTAGCGCTTACAGGCGCATTACGCGGCGTTCCTGGCGCAATATCAAGTGCAACGGAAGCCATCAGGGCCGGCA
GAAATATTATCGTCGCAACAGAGAACGCGGCGGAGGTTGGGCTTATAAGCAAAGAAGGATGTTTTATCGCCGATCATCTA
CAAACCGTCTGCGCCTTTCTGGAAGGGAAACACGCCCTGGAAAGACCTTTAGCTCAGGATATGGCATCGCCTACCGCAAC
TGCCGATCTTCGCGATGTGATCGGTCAGGAGCAGGGTAAACGCGGCCTGGAGATTACAGCGGCAGGGGGACATAATCTGC
TATTGATCGGCCCGCCGGGTACGGGTAAAACCATGCTGGCCAGTCGACTGAGCGGGATTCTTCCACCATTAAGCAATGAG
GAGGCGTTGGAAAGCGCCGCGATCCTCAGTCTGGTTAATGCCGATACGGTACAAAAACGATGGCAGCAACGCCCCTTTCG
CTCACCTCATCATAGCGCCTCACTTACTGCTATGGTCGGCGGCGGCGCAATACCCGCCCCGGGAGAGATATCGCTGGCGC
ACAACGGAATTTTGTTCCTTGATGAATTGCCTGAATTTGAACGACGCACACTGGATGCGCTACGTGAACCTATAGAATCC
GGTCAAATTCATTTATCCCGTACCAGAGCGAAAATAACGTACCCTGCCAGGTTCCAGTTAATCGCCGCAATGAATCCCAG
CCCGACCGGACATTATCAGGGAAACCATAATCGCTGCACGCCAGAACAGACACTACGTTACCTTAATCGGTTGTCAGGCC
CGTTTCTTGATCGTTTTGACCTTTCGCTTGAGATACCGCTTCCACCGCCCGGGATTCTTAGCCAACACGCCTCAAAGGGT
GAGAGCAGCGCTACGGTAAAAAAGCGGGTCATCGCCGCCCATGAACGGCAGTACCGACGCCAGAAGAAGTTAAACGCGCG
TCTGGAGGGTCGCGAAATCCAAAAATATTGTGTTTTGCATCACGATGACGCCCGCTGGCTTGAAGACACGCTGGTGCATC
TTGGATTATCCATTCGCGCCTGGCAGCGTTTACTAAAAGTTGCCAGAACCATTGCCGACATAGAACTGGCTGACCAGATC
TCGCGTCAGCATTTGCAGGAGGCGGTAAGCTATCGGGCGATAGACAGGTTGTTAATTCATTTGCAAAAGCTGTTGGCGTA
A

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-386)

3D structure

• AlphaFold DB: A0A3V4SQX5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	58.317	100	0.589
comM	Vibrio cholerae strain A1552	58.812	99.802	0.587
comM	Glaesserella parasuis strain SC1401	58.153	100	0.585
comM	Vibrio campbellii strain DS40M4	57.341	99.605	0.571
comM	Legionella pneumophila str. Paris	47.686	98.221	0.468
comM	Legionella pneumophila strain ERS1305867	47.686	98.221	0.468
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	42.998	100	0.431