Detailed information NTG1148425

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: MFPB19_RS03070
• Genome accession: NZ_LT960784
• Coordinates: 615222..617378 (+)
• Length: 718 a.a.
• NCBI ID: WP_099713255.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei isolate MFPB19
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 610222..622378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MFPB19_RS10760 (MFPB19_0630)	-	610465..610830 (+)	366	WP_231953458.1	LytTR family DNA-binding domain-containing protein	-
MFPB19_RS10520 (MFPB19_0631)	-	610997..611140 (+)	144	WP_011374270.1	hypothetical protein	-
MFPB19_RS03055 (MFPB19_0634)	-	612596..613264 (+)	669	WP_011374272.1	type II CAAX prenyl endopeptidase Rce1 family protein	-
MFPB19_RS10525 (MFPB19_0638)	-	614716..614889 (+)	174	WP_112220959.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
MFPB19_RS03065 (MFPB19_0639)	-	614874..615068 (+)	195	WP_076632457.1	hypothetical protein	-
MFPB19_RS03070 (MFPB19_0640)	comA	615222..617378 (+)	2157	WP_099713255.1	peptide cleavage/export ABC transporter	Regulator
MFPB19_RS03075 (MFPB19_0641)	-	617497..618768 (+)	1272	WP_157769671.1	bacteriocin secretion accessory protein	-
MFPB19_RS03080 (MFPB19_0642)	-	618954..619952 (+)	999	WP_012490951.1	IS30 family transposase	-
MFPB19_RS03085 (MFPB19_0643)	-	620013..620345 (+)	333	WP_076632459.1	bacteriocin immunity protein	-
MFPB19_RS03090 (MFPB19_0644)	-	620364..620651 (+)	288	WP_082267824.1	bacteriocin immunity protein	-
MFPB19_RS03095 (MFPB19_0646)	-	620717..621786 (+)	1070	WP_099769415.1	IS3-like element IS1520 family transposase	-

Sequence

Protein

• Length: 718 a.a.
• Molecular weight: 80351.83 Da
• Isoelectric Point: 6.5126

>NTDB_id=1148425 MFPB19_RS03070 WP_099713255.1 615222..617378(+) (comA) [Latilactobacillus sakei isolate MFPB19]
MIDCKIYIPQVDEMDCGVAALAMILKHYGSSVSLAYLRNEAKTDLEGTTALGLVKTAENLGFETKAIQADMSLFEVADLP
FPFIAHVLKNGELLHYYVVLGIKKDAIIIADPDPTVGVTKVAQSQFKAEWTGVALFIAPKPNYQPVKQQTKASLFSFVPT
LIKQKRLVINITLAALLITIISILGSYFLQTVIDTYIPNNMHSTLAIVAIGLIIFYGFQSIFTYAQTFLLTILGQRLSIE
IILSYLRHVFELPMSFFATRKTGEIISRFNDANKIIDALASAIISIFLDITVVVIMGSILMIQNTTLFWLTLAVIPIYVA
IITLFAKPFERLNQKEMESNAVLNSAIIEDLHGIETIKALTSEQERYQKIDTAFIDYLKKNFSYVKADTLQQAIKLFIQL
GLNVFVLWVGALLVTHNRLSIGQLMTYNALLAYFVNPLQNIINLQTKLQSARVANNRLNEVYLVDSEFKVDRPVKSETQL
IGPIELQNVSYQYGYGQKVLEAVNLRIMPNEKLTIVGMSGSGKSTLVKLLVDFFEPTEGKVLFNQQDTQTIDKKTLRQFF
NYIPQTPYIFSGTIWDNLKLGNRPGVTQADIIHACELAEIKTDIEKMPLQFETLLDEDGNTLSGGQKQRLTIARALLSPA
QVLIFDESTSGLDTITEGLLVDHLMALEEKTIIFIAHRLAIAKKTNNILVLENGRVVETGTHEMLVSAQGRYYQLLNH

Nucleotide

• Length: 2157 bp

>NTDB_id=1148425 MFPB19_RS03070 WP_099713255.1 615222..617378(+) (comA) [Latilactobacillus sakei isolate MFPB19]
ATGATAGATTGTAAAATATATATTCCGCAGGTTGATGAGATGGATTGTGGCGTAGCAGCCTTAGCGATGATTCTTAAGCA
TTATGGTTCTTCAGTTTCGCTGGCTTATTTACGTAATGAGGCTAAAACTGATTTAGAAGGAACAACGGCGCTTGGACTAG
TGAAGACAGCTGAGAATTTAGGTTTCGAAACGAAGGCAATTCAAGCTGACATGAGTTTGTTTGAAGTCGCAGATTTACCA
TTTCCTTTTATTGCACATGTTCTAAAAAATGGCGAGCTATTACATTATTATGTTGTACTAGGGATAAAAAAAGATGCCAT
TATAATTGCTGATCCTGATCCAACAGTTGGTGTTACTAAAGTGGCTCAATCACAGTTTAAAGCGGAATGGACAGGTGTTG
CTTTATTTATTGCACCAAAGCCGAACTATCAACCAGTTAAGCAACAAACAAAAGCGAGTTTATTCTCATTTGTCCCAACC
TTGATAAAACAAAAGCGGTTGGTGATTAATATTACATTAGCAGCTTTACTCATCACGATAATTAGTATTTTGGGTTCGTA
CTTCTTACAAACTGTAATTGATACGTATATTCCAAATAATATGCATAGTACATTAGCGATAGTCGCGATTGGGTTAATCA
TATTTTATGGTTTTCAGTCAATTTTTACATATGCACAGACCTTTTTACTAACAATCTTGGGGCAACGATTATCAATAGAA
ATTATTTTGAGTTACTTGAGGCACGTTTTTGAATTACCAATGTCATTTTTTGCAACACGAAAGACAGGGGAAATAATTTC
AAGATTCAATGATGCTAATAAAATTATTGATGCACTAGCGAGTGCGATTATTTCAATTTTTTTAGATATTACTGTGGTCG
TTATTATGGGCAGTATCTTGATGATTCAAAATACAACTTTATTTTGGTTAACTTTAGCGGTTATTCCAATTTATGTTGCA
ATCATTACTTTATTTGCGAAGCCATTTGAACGGTTGAATCAAAAGGAAATGGAAAGTAATGCAGTATTGAATTCAGCGAT
TATTGAAGATCTACATGGTATTGAAACAATTAAAGCATTAACAAGTGAACAGGAACGTTATCAAAAAATTGATACGGCGT
TTATTGATTACTTAAAAAAGAATTTTAGCTATGTTAAGGCTGATACACTGCAGCAGGCGATTAAGTTATTTATTCAATTA
GGATTAAACGTCTTTGTTTTGTGGGTTGGTGCGCTATTAGTTACCCATAATCGGTTATCAATCGGCCAGTTAATGACATA
TAATGCGCTATTGGCTTATTTTGTAAATCCATTACAGAATATTATTAATCTACAAACTAAATTACAAAGTGCGCGGGTTG
CTAACAATCGTTTGAACGAAGTGTATCTAGTAGACTCTGAATTTAAGGTAGATCGACCGGTTAAATCTGAGACACAATTG
ATAGGACCAATTGAATTACAGAATGTGAGTTATCAATACGGTTATGGTCAAAAGGTGTTAGAAGCGGTTAATCTAAGAAT
TATGCCAAATGAAAAACTGACAATTGTTGGCATGAGTGGATCGGGGAAATCAACATTAGTTAAGTTATTAGTTGATTTTT
TTGAACCAACGGAGGGAAAGGTTCTTTTTAATCAACAAGATACGCAGACAATTGATAAAAAGACATTGCGGCAGTTTTTT
AATTATATTCCGCAGACTCCTTATATTTTTTCAGGAACCATCTGGGATAATCTTAAGTTAGGTAATCGTCCCGGGGTTAC
ACAAGCTGATATCATTCATGCATGTGAATTAGCAGAAATTAAGACCGATATTGAAAAAATGCCTCTCCAATTTGAAACAT
TATTGGATGAAGATGGTAATACTTTATCAGGTGGTCAAAAACAGCGATTAACGATTGCGCGGGCACTCCTGTCACCAGCT
CAAGTATTAATATTTGATGAGTCAACTAGTGGGTTAGATACGATAACAGAGGGACTATTGGTTGATCATTTAATGGCATT
AGAAGAAAAAACAATCATTTTCATAGCGCATCGATTAGCGATTGCTAAGAAAACGAATAATATTCTGGTTTTAGAAAATG
GGAGAGTGGTTGAAACTGGAACACATGAAATGTTAGTGTCAGCACAGGGACGGTATTATCAATTGCTTAATCATTAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (500-650)

• Peptidase C39 family (Peptidase_C39) (7-141)

• ABC transporter transmembrane region (ABC_membrane) (168-438)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	59.072	99.025	0.585
comA	Streptococcus mitis SK321	58.509	99.025	0.579
comA	Streptococcus pneumoniae D39	58.368	99.025	0.578
comA	Streptococcus pneumoniae R6	58.368	99.025	0.578
comA	Streptococcus pneumoniae TIGR4	58.368	99.025	0.578
comA	Streptococcus pneumoniae Rx1	58.368	99.025	0.578
comA	Streptococcus gordonii str. Challis substr. CH1	56.962	99.025	0.564
comA/nlmT	Streptococcus mutans UA159	54.366	98.886	0.538