Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | CKV74_RS01730 | Genome accession | NZ_LT906463 |
| Coordinates | 349902..350228 (+) | Length | 108 a.a. |
| NCBI ID | WP_007243523.1 | Uniprot ID | - |
| Organism | Haemophilus pittmaniae strain NCTC13334 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 344902..355228
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV74_RS01710 (NCTC13334_00346) | lspA | 347340..347840 (+) | 501 | WP_007243516.1 | signal peptidase II | - |
| CKV74_RS01715 (NCTC13334_00347) | ispH | 347837..348781 (+) | 945 | WP_007243507.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CKV74_RS01720 (NCTC13334_00348) | rdgB | 348826..349425 (+) | 600 | WP_095176657.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| CKV74_RS01725 (NCTC13334_00349) | - | 349435..349752 (+) | 318 | WP_095176658.1 | YbjQ family protein | - |
| CKV74_RS01730 (NCTC13334_00350) | comE1/comEA | 349902..350228 (+) | 327 | WP_007243523.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| CKV74_RS01735 (NCTC13334_00351) | - | 350362..351507 (-) | 1146 | WP_007243485.1 | glycerate kinase | - |
| CKV74_RS01740 (NCTC13334_00352) | - | 351516..352778 (-) | 1263 | WP_007243487.1 | GntP family permease | - |
| CKV74_RS01745 (NCTC13334_00353) | - | 352898..353992 (-) | 1095 | WP_095176659.1 | sugar diacid recognition domain-containing protein | - |
| CKV74_RS01750 (NCTC13334_00354) | cysK | 354188..355138 (+) | 951 | WP_007243495.1 | cysteine synthase A | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 11544.34 Da Isoelectric Point: 9.0596
>NTDB_id=1147711 CKV74_RS01730 WP_007243523.1 349902..350228(+) (comE1/comEA) [Haemophilus pittmaniae strain NCTC13334]
MKLLKTLFGACIVASAMLSNNALAEDKVAESTAQTMQQSQADVAGKLNINTAGAAEIQRAMIGIGAKKAEAIIQYREKHG
NFTAVEQLLEVQGIGKATLEKNRDRITL
MKLLKTLFGACIVASAMLSNNALAEDKVAESTAQTMQQSQADVAGKLNINTAGAAEIQRAMIGIGAKKAEAIIQYREKHG
NFTAVEQLLEVQGIGKATLEKNRDRITL
Nucleotide
Download Length: 327 bp
>NTDB_id=1147711 CKV74_RS01730 WP_007243523.1 349902..350228(+) (comE1/comEA) [Haemophilus pittmaniae strain NCTC13334]
ATGAAACTATTAAAAACTCTCTTTGGAGCCTGCATCGTGGCTAGTGCAATGCTATCCAATAACGCCTTAGCTGAAGATAA
AGTGGCGGAAAGCACAGCACAAACCATGCAGCAAAGCCAAGCCGATGTAGCGGGTAAACTTAATATTAACACCGCTGGTG
CTGCTGAAATTCAACGAGCAATGATCGGCATCGGAGCAAAAAAAGCCGAAGCGATTATTCAGTACCGTGAAAAACATGGT
AATTTCACAGCAGTAGAACAACTGCTGGAAGTCCAAGGTATCGGTAAAGCCACCTTGGAAAAAAATCGGGACAGAATCAC
ATTATAA
ATGAAACTATTAAAAACTCTCTTTGGAGCCTGCATCGTGGCTAGTGCAATGCTATCCAATAACGCCTTAGCTGAAGATAA
AGTGGCGGAAAGCACAGCACAAACCATGCAGCAAAGCCAAGCCGATGTAGCGGGTAAACTTAATATTAACACCGCTGGTG
CTGCTGAAATTCAACGAGCAATGATCGGCATCGGAGCAAAAAAAGCCGAAGCGATTATTCAGTACCGTGAAAAACATGGT
AATTTCACAGCAGTAGAACAACTGCTGGAAGTCCAAGGTATCGGTAAAGCCACCTTGGAAAAAAATCGGGACAGAATCAC
ATTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
58.036 |
100 |
0.602 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
54.63 |
100 |
0.546 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
42.593 |
100 |
0.426 |
| comEA | Vibrio cholerae C6706 |
39.252 |
99.074 |
0.389 |
| comEA | Vibrio cholerae strain A1552 |
39.252 |
99.074 |
0.389 |