Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | CKV75_RS10700 | Genome accession | NZ_LT906456 |
| Coordinates | 2285684..2286049 (-) | Length | 121 a.a. |
| NCBI ID | WP_015674357.1 | Uniprot ID | K0G001 |
| Organism | Actinobacillus suis strain NCTC12996 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2280684..2291049
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV75_RS10685 (SAMEA4504061_02179) | - | 2281476..2282096 (+) | 621 | WP_015674354.1 | MerR family transcriptional regulator | - |
| CKV75_RS10690 (SAMEA4504061_02180) | gshAB | 2282188..2284461 (-) | 2274 | WP_015674355.1 | bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB | - |
| CKV75_RS10695 (SAMEA4504061_02181) | asd | 2284612..2285505 (-) | 894 | WP_015674356.1 | archaetidylserine decarboxylase | - |
| CKV75_RS10700 (SAMEA4504061_02182) | comEA/comE1 | 2285684..2286049 (-) | 366 | WP_015674357.1 | ComEA family DNA-binding protein | Machinery gene |
| CKV75_RS10705 (SAMEA4504061_02183) | - | 2286388..2287773 (+) | 1386 | WP_015674358.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| CKV75_RS10710 (SAMEA4504061_02184) | - | 2287847..2288302 (+) | 456 | WP_081541476.1 | MliC family protein | - |
| CKV75_RS10715 (SAMEA4504061_02185) | waaF | 2288385..2289422 (+) | 1038 | WP_015674360.1 | lipopolysaccharide heptosyltransferase II | - |
| CKV75_RS10720 (SAMEA4504061_02186) | rfaC | 2289498..2290457 (+) | 960 | WP_015674361.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| CKV75_RS10725 (SAMEA4504061_02187) | rpsL | 2290581..2290955 (+) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 12794.68 Da Isoelectric Point: 9.6912
>NTDB_id=1147553 CKV75_RS10700 WP_015674357.1 2285684..2286049(-) (comEA/comE1) [Actinobacillus suis strain NCTC12996]
MKTPSKLGLSLLIGMLSTGVLAAEKTKPSVTEPTPVVQNAQATSPEHSHAEMTNNANLVNINIATAAEIQDKLVGIGAKK
AQAIVEYRTKNGAFSSLEQLTDVSGIGKATLDKNRDRILLQ
MKTPSKLGLSLLIGMLSTGVLAAEKTKPSVTEPTPVVQNAQATSPEHSHAEMTNNANLVNINIATAAEIQDKLVGIGAKK
AQAIVEYRTKNGAFSSLEQLTDVSGIGKATLDKNRDRILLQ
Nucleotide
Download Length: 366 bp
>NTDB_id=1147553 CKV75_RS10700 WP_015674357.1 2285684..2286049(-) (comEA/comE1) [Actinobacillus suis strain NCTC12996]
ATGAAAACACCTTCAAAACTTGGCTTAAGTCTGTTAATCGGTATGTTATCTACCGGTGTATTAGCTGCTGAAAAAACAAA
GCCTAGTGTCACAGAACCCACTCCCGTGGTTCAAAACGCACAAGCAACCAGCCCTGAACATAGCCATGCTGAAATGACAA
ACAATGCAAATTTAGTCAATATCAATATCGCAACAGCAGCGGAAATCCAAGATAAATTAGTCGGTATTGGCGCTAAAAAA
GCACAAGCAATTGTTGAATACCGTACAAAAAACGGTGCATTTAGTAGCCTAGAGCAACTTACCGATGTATCCGGTATCGG
CAAAGCTACACTGGATAAAAATCGTGATCGCATCCTATTGCAATAA
ATGAAAACACCTTCAAAACTTGGCTTAAGTCTGTTAATCGGTATGTTATCTACCGGTGTATTAGCTGCTGAAAAAACAAA
GCCTAGTGTCACAGAACCCACTCCCGTGGTTCAAAACGCACAAGCAACCAGCCCTGAACATAGCCATGCTGAAATGACAA
ACAATGCAAATTTAGTCAATATCAATATCGCAACAGCAGCGGAAATCCAAGATAAATTAGTCGGTATTGGCGCTAAAAAA
GCACAAGCAATTGTTGAATACCGTACAAAAAACGGTGCATTTAGTAGCCTAGAGCAACTTACCGATGTATCCGGTATCGG
CAAAGCTACACTGGATAAAAATCGTGATCGCATCCTATTGCAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.504 |
100 |
0.595 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
50.526 |
78.512 |
0.397 |
| comEA | Acinetobacter baumannii strain A118 |
35.878 |
100 |
0.388 |
| comEA | Vibrio cholerae C6706 |
48.387 |
76.86 |
0.372 |
| comEA | Vibrio cholerae strain A1552 |
48.387 |
76.86 |
0.372 |