Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   CKV85_RS01730 Genome accession   NZ_LT906454
Coordinates   349888..350655 (+) Length   255 a.a.
NCBI ID   WP_017768996.1    Uniprot ID   A0A239WKU3
Organism   Streptococcus acidominimus strain NCTC11291     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 344888..355655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CKV85_RS01705 (SAMEA4504048_00358) - 344981..345874 (+) 894 WP_095121670.1 SPFH domain-containing protein -
  CKV85_RS01710 (SAMEA4504048_00359) - 346024..346143 (-) 120 WP_017768991.1 putative metal homeostasis protein -
  CKV85_RS01715 (SAMEA4504048_00360) - 346413..347153 (-) 741 WP_017768992.1 amino acid ABC transporter ATP-binding protein -
  CKV85_RS01720 (SAMEA4504048_00361) - 347146..348714 (-) 1569 WP_095121673.1 ABC transporter substrate-binding protein/permease -
  CKV85_RS01725 (SAMEA4504048_00362) - 348896..349735 (+) 840 WP_095121675.1 undecaprenyl-diphosphate phosphatase -
  CKV85_RS01730 (SAMEA4504048_00363) mecA 349888..350655 (+) 768 WP_017768996.1 adaptor protein MecA Regulator
  CKV85_RS01735 (SAMEA4504048_00364) - 350655..351821 (+) 1167 WP_017768997.1 glycosyltransferase family 4 protein -
  CKV85_RS01740 (SAMEA4504048_00365) sufC 351903..352676 (+) 774 WP_095121677.1 Fe-S cluster assembly ATPase SufC -
  CKV85_RS01745 (SAMEA4504048_00366) sufD 352686..353948 (+) 1263 WP_095121679.1 Fe-S cluster assembly protein SufD -
  CKV85_RS01750 (SAMEA4504048_00367) - 354019..355245 (+) 1227 WP_095121681.1 cysteine desulfurase -

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29355.27 Da        Isoelectric Point: 4.1972

>NTDB_id=1147468 CKV85_RS01730 WP_017768996.1 349888..350655(+) (mecA) [Streptococcus acidominimus strain NCTC11291]
MEMKQISETTLKIIISMEDLEERGMELKDFLIPQEKTEEFFYTVMDELDLPDNFKNSGMLSFRVTPKKDRLDVFVTKSEI
DKDLNFEDLADLGDVSQMSPDEFFKTLEKSMLEKGDVDAHKKLKQMEDMVESAMTDAMAASEQTSDPVSEEDDALDTPEY
THYVLIFSTVKEVVRFSKAIDFEVEASELYKLSGQYYMTVLVGLEDKPAYYADLIHSRLLEYSREGLKTRAYLQEHGVRL
LEGTAIQILEGIRVN

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1147468 CKV85_RS01730 WP_017768996.1 349888..350655(+) (mecA) [Streptococcus acidominimus strain NCTC11291]
ATGGAAATGAAACAAATTAGCGAAACGACGCTAAAAATTATAATTAGTATGGAAGACTTAGAAGAACGGGGAATGGAGTT
GAAAGATTTCTTGATTCCACAAGAAAAAACGGAAGAGTTTTTTTATACCGTTATGGATGAGTTGGATTTGCCCGATAATT
TTAAAAACAGTGGCATGCTCAGTTTTAGGGTGACGCCCAAAAAGGATCGCTTAGATGTTTTTGTGACAAAGTCTGAGATT
GATAAAGACCTTAATTTTGAAGATTTGGCGGATCTTGGCGATGTTTCGCAAATGTCACCGGATGAATTTTTTAAGACATT
GGAAAAATCGATGTTGGAGAAAGGGGATGTAGATGCCCATAAAAAACTAAAACAAATGGAAGATATGGTTGAGTCAGCAA
TGACAGATGCTATGGCAGCATCTGAACAAACCTCTGATCCCGTATCCGAAGAGGACGATGCTTTGGATACACCGGAGTAT
ACTCACTATGTTCTGATATTTTCAACAGTTAAAGAGGTTGTTAGATTTTCAAAAGCGATTGATTTTGAGGTTGAAGCTTC
TGAATTGTATAAACTTTCTGGGCAGTATTATATGACAGTATTAGTTGGTCTCGAGGACAAACCTGCTTATTATGCTGACT
TGATTCATTCAAGATTGTTAGAATATAGTCGCGAAGGTTTAAAAACACGTGCTTACCTCCAAGAACATGGTGTTCGTTTA
TTGGAAGGGACTGCTATCCAAATATTAGAGGGTATTAGGGTGAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A239WKU3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus mutans UA159

60.714

98.824

0.6

  mecA Streptococcus thermophilus LMD-9

55.906

99.608

0.557

  mecA Streptococcus thermophilus LMG 18311

55.118

99.608

0.549

  mecA Streptococcus pneumoniae Rx1

47.471

100

0.478

  mecA Streptococcus pneumoniae D39

47.471

100

0.478

  mecA Streptococcus pneumoniae R6

47.471

100

0.478

  mecA Streptococcus pneumoniae TIGR4

47.471

100

0.478


Multiple sequence alignment