Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | CKV84_RS05035 | Genome accession | NZ_LT906452 |
| Coordinates | 1071738..1072337 (+) | Length | 199 a.a. |
| NCBI ID | WP_011213355.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain NCTC11985 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1066738..1077337
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV84_RS05020 (SAMEA4040028_00984) | ravI | 1068684..1069691 (-) | 1008 | WP_011946020.1 | Dot/Icm T4SS effector RavI | - |
| CKV84_RS05025 (SAMEA4040028_00985) | pilM | 1070108..1071172 (+) | 1065 | WP_011215094.1 | type IV pilus assembly protein PilM | Machinery gene |
| CKV84_RS05030 (SAMEA4040028_00986) | pilN | 1071176..1071724 (+) | 549 | WP_011213354.1 | PilN domain-containing protein | Machinery gene |
| CKV84_RS05035 (SAMEA4040028_00987) | pilO | 1071738..1072337 (+) | 600 | WP_011213355.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CKV84_RS05040 (SAMEA4040028_00988) | pilP | 1072334..1072918 (+) | 585 | WP_011213356.1 | pilus assembly protein PilP | Machinery gene |
| CKV84_RS05045 (SAMEA4040028_00989) | pilQ | 1072922..1075018 (+) | 2097 | WP_027220941.1 | type IV pilus secretin PilQ | Machinery gene |
| CKV84_RS05050 (SAMEA4040028_00990) | aroK | 1075464..1075991 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| CKV84_RS05055 (SAMEA4040028_00991) | aroB | 1075978..1077087 (+) | 1110 | WP_027220942.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22523.24 Da Isoelectric Point: 5.3369
>NTDB_id=1147426 CKV84_RS05035 WP_011213355.1 1071738..1072337(+) (pilO) [Legionella pneumophila strain NCTC11985]
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=1147426 CKV84_RS05035 WP_011213355.1 1071738..1072337(+) (pilO) [Legionella pneumophila strain NCTC11985]
ATGGACACAGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGCTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACCTTGCATGAATTTAGTGTTGAGGGGGTATCATCCGGGGATGGTAAAACAGTCTCTCAGGATGAATTGGTGAT
GGCTATTACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACAGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTAATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGCTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCTGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACCTTGCATGAATTTAGTGTTGAGGGGGTATCATCCGGGGATGGTAAAACAGTCTCTCAGGATGAATTGGTGAT
GGCTATTACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
100 |
100 |
1 |
| comO | Acinetobacter baylyi ADP1 |
39.791 |
95.98 |
0.382 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |