Detailed information NTG1147369

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CKV78_RS08335
• Genome accession: NZ_LT906448
• Coordinates: 1832924..1834057 (+)
• Length: 377 a.a.
• NCBI ID: WP_005763830.1
• Uniprot ID: -
• Organism: Pasteurella dagmatis strain NCTC11617
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1827924..1839057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CKV78_RS08315 (SAMEA4362423_01707)	napG	1830077..1830829 (+)	753	WP_005763824.1	ferredoxin-type protein NapG	-
CKV78_RS08320 (SAMEA4362423_01708)	napH	1830829..1831704 (+)	876	WP_005763826.1	quinol dehydrogenase ferredoxin subunit NapH	-
CKV78_RS08325 (SAMEA4362423_01709)	-	1831710..1832135 (+)	426	WP_032855443.1	nitrate reductase cytochrome c-type subunit	-
CKV78_RS08330 (SAMEA4362423_01710)	-	1832151..1832744 (+)	594	WP_005763829.1	cytochrome c3 family protein	-
CKV78_RS08335 (SAMEA4362423_01711)	dprA	1832924..1834057 (+)	1134	WP_005763830.1	DNA-processing protein DprA	Machinery gene
CKV78_RS08340 (SAMEA4362423_01712)	malQ	1834100..1836184 (-)	2085	WP_005763831.1	4-alpha-glucanotransferase	-
CKV78_RS08345 (SAMEA4362423_01713)	malP	1836285..1838675 (-)	2391	WP_005763832.1	maltodextrin phosphorylase	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 42541.95 Da
• Isoelectric Point: 7.3461

>NTDB_id=1147369 CKV78_RS08335 WP_005763830.1 1832924..1834057(+) (dprA) [Pasteurella dagmatis strain NCTC11617]
MRKSALNKPISLLLRLQQIPRLGPTRIHQLLTHTSFSDLADYDSDAFRHMGWTKQQIERWFNPEIKFIEPAFIWAEKEGN
HLIHYFDHRYPPLLKQTEGAPLILFAKGNVAALSVQQIAIVGSRHCSSYGEYWAKYFATEFALADIVVTSGLALGIDGFC
HQAVVDAKGKTVAVLGSGLERIYPKKHQYLAQQIIEQQGVLVSEFFPHQPPTAENFPRRNRIISGLSLGTLVIEASERSG
SLITARYALEQNRDVFALPGNIQSEFSHGCHKLIKQGAMLVENVQDVLENISPHIFDYVKRPYDIFTRSTPEPTVKTLPP
LVQPEYPDLFAKIGYTPVSLDDLSEKLKLSVDTLLVQLLALELQDLIVAENGLYKRR

Nucleotide

• Length: 1134 bp

>NTDB_id=1147369 CKV78_RS08335 WP_005763830.1 1832924..1834057(+) (dprA) [Pasteurella dagmatis strain NCTC11617]
TTGAGAAAAAGTGCGTTAAACAAACCAATTAGCCTGCTCTTACGCCTACAGCAAATTCCACGTTTAGGCCCAACTCGAAT
TCACCAACTCCTTACCCATACTTCTTTTAGTGATCTCGCTGATTACGATAGTGATGCTTTTCGTCATATGGGTTGGACAA
AACAACAAATTGAACGATGGTTTAATCCGGAAATAAAATTTATCGAACCTGCATTTATTTGGGCAGAGAAAGAAGGAAAC
CACCTCATTCACTATTTTGATCATCGCTATCCTCCTTTGTTAAAACAAACTGAAGGCGCACCATTAATTTTGTTTGCAAA
AGGCAATGTGGCAGCATTATCAGTACAACAAATTGCGATTGTAGGAAGCCGCCATTGTTCAAGTTACGGTGAATACTGGG
CAAAATACTTTGCCACTGAATTTGCATTAGCGGACATTGTAGTGACCAGCGGTTTAGCGTTGGGTATCGATGGATTTTGT
CATCAAGCGGTGGTAGATGCGAAAGGCAAAACAGTAGCAGTACTAGGCAGTGGCTTAGAGCGAATTTACCCGAAAAAGCA
TCAATACCTCGCACAACAAATTATTGAACAGCAAGGTGTGTTGGTATCAGAGTTTTTCCCGCATCAACCACCAACCGCAG
AGAATTTTCCTCGCCGAAATCGGATTATTAGCGGGTTGTCTTTAGGTACACTTGTCATTGAGGCATCAGAACGTAGCGGC
TCGCTGATTACTGCACGTTATGCTTTGGAACAAAACCGTGATGTATTTGCCTTACCGGGTAATATTCAAAGTGAATTCAG
TCACGGTTGCCATAAATTAATCAAGCAAGGAGCTATGCTAGTGGAAAATGTGCAAGATGTACTTGAAAACATTTCACCGC
ATATTTTTGATTATGTGAAACGTCCTTACGATATTTTTACACGTTCAACGCCAGAACCTACAGTAAAAACGTTACCTCCG
TTAGTACAACCAGAATACCCTGATTTATTTGCAAAAATCGGCTATACACCAGTGAGTTTGGATGATTTATCAGAAAAGTT
AAAATTATCGGTAGATACTTTGCTTGTGCAATTGTTGGCGTTAGAGTTACAAGATTTAATTGTGGCAGAAAATGGATTAT
ATAAACGTAGATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-282)

• DprA winged helix domain (DprA_WH) (320-371)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.214	100	0.615
dprA	Glaesserella parasuis strain SC1401	53.541	93.634	0.501
dprA	Vibrio campbellii strain DS40M4	43.562	96.817	0.422
dprA	Vibrio cholerae strain A1552	41.223	99.735	0.411
dprA	Legionella pneumophila strain ERS1305867	39.566	97.878	0.387