Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   STN4L_RS06305 Genome accession   NZ_LS974444
Coordinates   1210603..1211352 (-) Length   249 a.a.
NCBI ID   WP_011680667.1    Uniprot ID   Q03MN5
Organism   Streptococcus thermophilus strain N4L     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1205603..1216352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STN4L_RS06285 (STN4L_01472) - 1205926..1207158 (-) 1233 WP_113870450.1 cysteine desulfurase -
  STN4L_RS06290 (STN4L_01473) sufD 1207212..1208474 (-) 1263 WP_014621089.1 Fe-S cluster assembly protein SufD -
  STN4L_RS06295 (STN4L_01474) sufC 1208511..1209281 (-) 771 WP_002947634.1 Fe-S cluster assembly ATPase SufC -
  STN4L_RS06300 (STN4L_01475) - 1209442..1210599 (-) 1158 WP_014621088.1 glycosyltransferase family 4 protein -
  STN4L_RS06305 (STN4L_01476) mecA 1210603..1211352 (-) 750 WP_011680667.1 adaptor protein MecA Regulator
  STN4L_RS06310 - 1211636..1211926 (+) 291 WP_223899616.1 DUF3021 family protein -
  STN4L_RS06315 (STN4L_01478) - 1211978..1212832 (-) 855 WP_011680666.1 undecaprenyl-diphosphate phosphatase -
  STN4L_RS06320 (STN4L_01479) - 1213035..1214585 (+) 1551 WP_011680665.1 ABC transporter substrate-binding protein/permease -
  STN4L_RS06325 (STN4L_01480) - 1214585..1215325 (+) 741 WP_002949253.1 amino acid ABC transporter ATP-binding protein -
  STN4L_RS06330 (STN4L_01481) - 1215412..1215519 (-) 108 WP_081247985.1 LPXTG cell wall anchor domain-containing protein -
  STN4L_RS10065 (STN4L_01482) - 1215606..1215776 (-) 171 WP_011680664.1 hypothetical protein -

Sequence


Protein


Download         Length: 249 a.a.        Molecular weight: 29174.68 Da        Isoelectric Point: 4.0481

>NTDB_id=1143041 STN4L_RS06305 WP_011680667.1 1210603..1211352(-) (mecA) [Streptococcus thermophilus strain N4L]
MEMKQISETTLKIMITMEDLEEHGMELKDFLIPQEKTEEFFYTVMDELDLPDNFKNSGMLSFRVTPRKDRVDVFVTKSDL
KEDLDFNDLSDMEDYSGLSPEEFLKALEDNFMDKGDIEAHHKLEEHDKTLKEVDETMTEPAKEVAEETIREDYTHYVLAF
SDFDQVVTFAQGLKNVSVEGSEFYKLGDVYYMTILLYLADEPDYYANNMYARFLEYANVADRTRPYLQEHATILMEEDAL
PVLQATKWS

Nucleotide


Download         Length: 750 bp        

>NTDB_id=1143041 STN4L_RS06305 WP_011680667.1 1210603..1211352(-) (mecA) [Streptococcus thermophilus strain N4L]
ATGGAAATGAAACAAATAAGCGAGACAACTCTAAAAATCATGATTACCATGGAAGATCTTGAAGAACATGGTATGGAGCT
GAAAGATTTCTTGATTCCCCAGGAAAAAACAGAGGAATTTTTCTATACTGTCATGGATGAGTTGGACTTGCCTGATAACT
TTAAAAATAGTGGGATGTTGAGCTTCCGTGTCACGCCACGAAAGGATCGTGTGGATGTTTTTGTGACTAAATCAGATCTT
AAGGAAGACCTTGATTTCAATGATTTGTCAGATATGGAAGACTATTCAGGACTTTCTCCAGAAGAATTCCTCAAAGCTCT
TGAAGATAACTTTATGGATAAGGGAGATATTGAAGCCCACCATAAGCTCGAAGAGCATGATAAGACCTTGAAAGAGGTTG
ATGAGACTATGACAGAGCCGGCTAAGGAAGTGGCTGAGGAAACTATTCGTGAAGATTATACTCACTATGTCTTGGCTTTC
TCTGACTTTGATCAAGTAGTGACCTTTGCGCAAGGTTTGAAGAATGTGTCAGTGGAGGGTTCTGAATTTTATAAACTTGG
TGATGTCTACTATATGACTATCCTTCTTTACTTGGCTGATGAGCCTGATTATTACGCGAACAATATGTATGCGCGTTTTC
TTGAATATGCGAATGTGGCAGACCGAACACGTCCCTATCTACAAGAGCATGCAACAATCTTGATGGAAGAGGACGCCTTA
CCGGTATTACAAGCAACGAAATGGAGCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q03MN5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus thermophilus LMD-9

100

100

1

  mecA Streptococcus thermophilus LMG 18311

99.197

100

0.992

  mecA Streptococcus mutans UA159

57.787

97.992

0.566

  mecA Streptococcus pneumoniae Rx1

46.586

100

0.466

  mecA Streptococcus pneumoniae D39

46.586

100

0.466

  mecA Streptococcus pneumoniae R6

46.586

100

0.466

  mecA Streptococcus pneumoniae TIGR4

46.586

100

0.466


Multiple sequence alignment