Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Machinery gene |
| Locus tag | DQL19_RS03145 | Genome accession | NZ_LS483480 |
| Coordinates | 609592..610098 (+) | Length | 168 a.a. |
| NCBI ID | WP_011272049.1 | Uniprot ID | Q4QNA7 |
| Organism | Haemophilus influenzae strain NCTC13377 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 604592..615098
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL19_RS03125 (NCTC13377_00610) | - | 604697..605026 (-) | 330 | WP_005629464.1 | YbaB/EbfC family nucleoid-associated protein | - |
| DQL19_RS03130 (NCTC13377_00611) | - | 605179..606024 (-) | 846 | WP_015701650.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| DQL19_RS03135 (NCTC13377_00612) | - | 606101..608695 (-) | 2595 | WP_077643690.1 | penicillin-binding protein 1A | - |
| DQL19_RS03140 (NCTC13377_00613) | comA | 608794..609591 (+) | 798 | WP_005693722.1 | competence protein A | Machinery gene |
| DQL19_RS03145 (NCTC13377_00614) | comB | 609592..610098 (+) | 507 | WP_011272049.1 | competence protein ComB | Machinery gene |
| DQL19_RS03150 (NCTC13377_00615) | comC | 610095..610616 (+) | 522 | WP_077643691.1 | competence protein ComC | Machinery gene |
| DQL19_RS03155 (NCTC13377_00616) | comD | 610613..611026 (+) | 414 | WP_015701647.1 | pilus assembly protein PilP | Machinery gene |
| DQL19_RS03160 (NCTC13377_00617) | comE | 611036..612373 (+) | 1338 | WP_015701646.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| DQL19_RS03165 (NCTC13377_00618) | - | 612386..613072 (+) | 687 | WP_015701645.1 | ComF family protein | - |
| DQL19_RS03170 (NCTC13377_00619) | nfuA | 613148..613744 (+) | 597 | WP_005649300.1 | Fe-S biogenesis protein NfuA | - |
| DQL19_RS03175 (NCTC13377_00620) | nudC | 613811..614605 (+) | 795 | WP_015701644.1 | NAD(+) diphosphatase | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 19697.54 Da Isoelectric Point: 7.4684
>NTDB_id=1142483 DQL19_RS03145 WP_011272049.1 609592..610098(+) (comB) [Haemophilus influenzae strain NCTC13377]
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQTSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
Nucleotide
Download Length: 507 bp
>NTDB_id=1142483 DQL19_RS03145 WP_011272049.1 609592..610098(+) (comB) [Haemophilus influenzae strain NCTC13377]
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGCTTGGAAGGTAACGCACAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAACAACTTAATCAGCAACTTCACAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGCTTGGAAGGTAACGCACAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Haemophilus influenzae 86-028NP |
100 |
100 |
1 |
| comB | Haemophilus influenzae Rd KW20 |
98.81 |
100 |
0.988 |