Detailed information NTG1142418

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: DQL67_RS08710
• Genome accession: NZ_LS483473
• Coordinates: 1853323..1854021 (-)
• Length: 232 a.a.
• NCBI ID: WP_111759222.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain NCTC10382
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 1848323..1859021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL67_RS08690 (NCTC10382_01769)	-	1849665..1850348 (-)	684	WP_005718066.1	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	-
DQL67_RS08695 (NCTC10382_01770)	envC	1850531..1851760 (+)	1230	WP_172452388.1	murein hydrolase activator EnvC	-
DQL67_RS08700 (NCTC10382_01771)	-	1851757..1852599 (+)	843	WP_111759221.1	divergent polysaccharide deacetylase family protein	-
DQL67_RS11215 (NCTC10382_01772)	-	1852620..1853018 (+)	399	WP_231965581.1	hypothetical protein	-
DQL67_RS11220 (NCTC10382_01773)	-	1853021..1853257 (+)	237	WP_231965583.1	hypothetical protein	-
DQL67_RS08710 (NCTC10382_01774)	comM	1853323..1854021 (-)	699	WP_111759222.1	ATP-binding protein	Machinery gene
DQL67_RS08715 (NCTC10382_01775)	-	1854157..1854819 (+)	663	WP_111759223.1	TnsA endonuclease N-terminal domain-containing protein	-
DQL67_RS08720 (NCTC10382_01776)	-	1854812..1856731 (+)	1920	WP_111759224.1	Mu transposase C-terminal domain-containing protein	-
DQL67_RS08725 (NCTC10382_01777)	-	1856731..1857624 (+)	894	WP_111759225.1	TniB family NTP-binding protein	-
DQL67_RS08730 (NCTC10382_01778)	-	1857582..1858700 (+)	1119	WP_111759226.1	TniQ family protein	-

Sequence

Protein

• Length: 232 a.a.
• Molecular weight: 26095.12 Da
• Isoelectric Point: 9.4141

>NTDB_id=1142418 DQL67_RS08710 WP_111759222.1 1853323..1854021(-) (comM) [Pasteurella multocida strain NCTC10382]
MPLICNFDSGTIPKPGEISLAHNGVLFLDELPEFERKVLDALRQPLESGEIIISRANAKIQFPARFQLIAAMNPSPTGHY
QGTHNRTSPQQILRYLNRLSGPFLDRFDLSIEVPLLPKGALQQQTDRGESSAQVREKVLKVRDIQLARAGKINAYLTSKE
IERDCKISDQDALFLENALAKLGLSVRAYHRILKVARTIADLNNERQIQQCHLAEALGYRAMDRLLQKLSAM

Nucleotide

• Length: 699 bp

>NTDB_id=1142418 DQL67_RS08710 WP_111759222.1 1853323..1854021(-) (comM) [Pasteurella multocida strain NCTC10382]
ATGCCACTTATTTGTAACTTTGACAGCGGCACCATACCCAAACCCGGTGAAATTTCGCTCGCACACAATGGGGTGTTATT
TCTCGATGAGTTACCAGAATTTGAACGTAAAGTATTAGATGCCTTACGTCAACCTTTGGAAAGTGGTGAAATTATCATTT
CGCGTGCCAATGCAAAAATTCAATTCCCCGCTCGTTTTCAATTAATTGCCGCCATGAATCCTAGCCCAACGGGACATTAT
CAAGGTACTCACAATCGCACCTCACCACAACAAATCTTGCGTTATCTCAATCGCTTATCCGGTCCGTTTTTAGATCGCTT
TGATTTGTCAATCGAAGTCCCTTTGCTACCCAAAGGCGCGTTACAACAGCAAACAGATCGGGGCGAAAGTAGCGCACAAG
TGAGAGAAAAAGTATTAAAAGTACGCGACATACAACTGGCGCGTGCGGGGAAAATTAATGCTTATTTGACCAGTAAAGAA
ATTGAGCGAGACTGTAAGATCAGTGATCAAGATGCGTTATTTTTAGAAAATGCCTTAGCTAAATTGGGGTTATCCGTGCG
CGCCTATCATCGTATTTTAAAAGTAGCACGCACCATTGCAGACTTAAATAATGAACGCCAAATTCAACAATGCCACCTCG
CCGAAGCACTGGGTTATCGGGCGATGGATAGGCTGTTACAGAAGTTATCTGCGATGTAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (128-220)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (9-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	84.914	100	0.849
comM	Glaesserella parasuis strain SC1401	81.579	98.276	0.802
comM	Vibrio cholerae strain A1552	69.507	96.121	0.668
comM	Vibrio campbellii strain DS40M4	67.713	96.121	0.651
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	52.423	97.845	0.513
comM	Legionella pneumophila str. Paris	51.402	92.241	0.474
comM	Legionella pneumophila strain ERS1305867	51.402	92.241	0.474