Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC/cflB   Type   Machinery gene
Locus tag   DQN71_RS02555 Genome accession   NZ_LS483471
Coordinates   496455..497120 (+) Length   221 a.a.
NCBI ID   WP_015605257.1    Uniprot ID   A0A512AC44
Organism   Streptococcus cristatus strain NCTC13807     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 491455..502120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN71_RS02530 (NCTC13807_00489) - 491606..493006 (+) 1401 WP_015605262.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  DQN71_RS02535 (NCTC13807_00490) - 493006..493368 (+) 363 WP_015605261.1 S1 RNA-binding domain-containing protein -
  DQN71_RS02540 (NCTC13807_00491) cysK 493419..494348 (-) 930 WP_015605260.1 cysteine synthase A -
  DQN71_RS02545 (NCTC13807_00492) - 494465..495100 (-) 636 WP_015605259.1 YigZ family protein -
  DQN71_RS02550 (NCTC13807_00493) comFA/cflA 495157..496458 (+) 1302 WP_041826810.1 DEAD/DEAH box helicase Machinery gene
  DQN71_RS02555 (NCTC13807_00494) comFC/cflB 496455..497120 (+) 666 WP_015605257.1 ComF family protein Machinery gene
  DQN71_RS02560 (NCTC13807_00495) hpf 497202..497744 (+) 543 WP_015605256.1 ribosome hibernation-promoting factor, HPF/YfiA family -
  DQN71_RS02565 (NCTC13807_00496) - 497896..501018 (+) 3123 WP_015605255.1 DEAD/DEAH box helicase -
  DQN71_RS02570 (NCTC13807_00497) - 501051..501722 (+) 672 WP_111694502.1 cystathionine gamma-synthase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25504.54 Da        Isoelectric Point: 8.1553

>NTDB_id=1142305 DQN71_RS02555 WP_015605257.1 496455..497120(+) (comFC/cflB) [Streptococcus cristatus strain NCTC13807]
MRNCLLCSQAVEENRTFSSLILLQKEKYTICNHCRAGFEAISSIHCPRCWKEGEAEVCSDCQTWEAQGYLVQHQACFLYN
DLMKDYFSKYKFQGDYLLRFVFAEVLKKSLGNFKKYTLVPIPVSLEKYQSRGFNQVEGFLQATGLPYKHLLEKQDVLAQS
SKNRQERLKSQQCFTLAKDVLLPEKILLIDDVYTTGKTLQLARELLLEAGVKEVLTFSLAR

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1142305 DQN71_RS02555 WP_015605257.1 496455..497120(+) (comFC/cflB) [Streptococcus cristatus strain NCTC13807]
ATGAGAAATTGCCTGTTATGCAGCCAAGCAGTCGAAGAAAATAGGACTTTTTCTTCCTTGATTTTATTGCAAAAAGAAAA
ATATACAATTTGTAACCATTGTCGGGCAGGATTTGAAGCTATTTCCTCTATCCATTGCCCACGCTGCTGGAAGGAGGGAG
AGGCGGAAGTCTGTTCGGATTGTCAAACCTGGGAAGCGCAAGGCTATTTAGTTCAGCATCAGGCCTGTTTTCTTTATAAT
GACTTGATGAAGGACTACTTCAGCAAATACAAGTTTCAAGGGGATTATCTTCTAAGATTTGTTTTTGCGGAAGTTCTCAA
AAAAAGTCTCGGAAACTTCAAAAAATATACTCTGGTTCCTATTCCAGTCAGTCTTGAAAAATACCAAAGTCGAGGTTTTA
ATCAGGTAGAAGGCTTCTTGCAAGCTACTGGTTTGCCTTATAAACATTTGCTTGAAAAGCAGGATGTGCTTGCTCAATCC
AGTAAAAATCGCCAAGAACGTTTAAAAAGCCAGCAATGTTTTACATTGGCAAAAGATGTCCTCCTACCAGAAAAAATTCT
ACTGATAGACGATGTGTATACGACTGGAAAAACCTTGCAATTGGCTCGAGAATTATTGCTGGAAGCAGGTGTGAAAGAAG
TTTTGACATTTTCACTCGCAAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A512AC44

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC/cflB Streptococcus pneumoniae Rx1

50

98.643

0.493
  comFC/cflB Streptococcus pneumoniae D39

50

98.643

0.493
  comFC/cflB Streptococcus pneumoniae R6

50

98.643

0.493
  comFC/cflB Streptococcus pneumoniae TIGR4

50

98.643

0.493
  comFC/cflB Streptococcus mitis SK321

49.541

98.643

0.489
  comFC/cflB Streptococcus mitis NCTC 12261

49.541

98.643

0.489

Multiple sequence alignment