Detailed information NTG1141466

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: DQN42_RS08350
• Genome accession: NZ_LS483436
• Coordinates: 1698067..1699020 (-)
• Length: 317 a.a.
• NCBI ID: WP_003075742.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain NCTC11324
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1693067..1704020

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN42_RS08340 (NCTC11324_01679)	glmS	1694625..1696439 (-)	1815	WP_003076077.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
DQN42_RS08345 (NCTC11324_01680)	-	1696821..1698020 (-)	1200	WP_003076127.1	acetate kinase	-
DQN42_RS08350 (NCTC11324_01681)	comYH	1698067..1699020 (-)	954	WP_003075742.1	class I SAM-dependent methyltransferase	Machinery gene
DQN42_RS08355 (NCTC11324_01682)	comGG	1699111..1699437 (-)	327	WP_014829817.1	competence type IV pilus minor pilin ComGG	-
DQN42_RS08360 (NCTC11324_01683)	comGF/cglF	1699418..1699855 (-)	438	WP_003073990.1	competence type IV pilus minor pilin ComGF	Machinery gene
DQN42_RS08365 (NCTC11324_01684)	comGE/cglE	1699839..1700132 (-)	294	WP_003073987.1	competence type IV pilus minor pilin ComGE	Machinery gene
DQN42_RS08370 (NCTC11324_01685)	comYD	1700104..1700532 (-)	429	WP_014829819.1	competence type IV pilus minor pilin ComGD	Machinery gene
DQN42_RS08375 (NCTC11324_01686)	comYC	1700492..1700809 (-)	318	WP_003075998.1	competence type IV pilus major pilin ComGC	Machinery gene
DQN42_RS08380 (NCTC11324_01687)	comYB	1700806..1701828 (-)	1023	WP_172634362.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQN42_RS08385 (NCTC11324_01688)	comYA	1701770..1702711 (-)	942	WP_003073980.1	competence type IV pilus ATPase ComGA	Machinery gene
DQN42_RS08390 (NCTC11324_01689)	-	1702780..1703145 (-)	366	WP_003075933.1	DUF1033 family protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 36077.03 Da
• Isoelectric Point: 4.4688

>NTDB_id=1141466 DQN42_RS08350 WP_003075742.1 1698067..1699020(-) (comYH) [Streptococcus intermedius strain NCTC11324]
MNFEKIEQAYTLLLENIQEIQNDLLTNFYDALVEQNGIYLDGKTELATVKKNNEILNSLKLSKEEWRRSYQFLLMKAAQT
EPLQANHQFTPDSIGFIVTFLIDQLSNKEHIDVLEIGSGMGNLSETILNNTKKNVDYLGLELDDLLIDVSASIADVMDAK
VSFVQGDAVRPQVLKESDVIVSDLPIGYYPDDYIASRYEVASTQEHTYAHHLLMEQSLKYLKPGGYAIFLAPNNLLTSRQ
SQLLKNWLQKYVQIVAMIALPESLFGNAAYAKTIFVLKKQDEQAIQSFVYALTDLQNQAALLTFSEKFQNWRQESEI

Nucleotide

• Length: 954 bp

>NTDB_id=1141466 DQN42_RS08350 WP_003075742.1 1698067..1699020(-) (comYH) [Streptococcus intermedius strain NCTC11324]
ATGAATTTTGAAAAAATTGAACAGGCCTATACGCTCCTGTTAGAAAATATCCAAGAAATCCAAAATGATCTTTTAACGAA
TTTTTATGATGCCTTGGTAGAGCAAAACGGGATTTATCTGGATGGAAAGACAGAGCTAGCCACTGTCAAAAAAAATAATG
AAATACTAAACTCTTTGAAATTAAGTAAAGAAGAATGGCGCAGGAGCTACCAATTTTTACTGATGAAAGCGGCTCAAACG
GAGCCTTTGCAAGCCAATCATCAATTTACTCCGGATTCTATTGGTTTTATCGTAACATTTCTCATTGACCAATTGAGTAA
TAAAGAACATATTGATGTTTTGGAAATTGGTAGCGGAATGGGGAATTTATCAGAGACCATTCTCAATAATACAAAGAAAA
ATGTGGATTACCTAGGACTAGAATTGGACGATTTGTTAATTGATGTATCAGCTAGCATAGCAGATGTGATGGATGCAAAG
GTTAGTTTTGTACAAGGTGATGCAGTGCGCCCACAAGTATTAAAAGAAAGTGATGTGATTGTTAGCGATTTGCCGATTGG
CTATTATCCGGATGATTACATTGCATCGCGCTATGAAGTGGCTAGTACGCAAGAGCATACCTATGCCCATCATTTGTTAA
TGGAACAATCGCTCAAGTATCTGAAACCAGGCGGTTATGCGATATTTCTTGCGCCAAATAATTTATTAACTAGTAGGCAG
AGTCAATTATTGAAAAATTGGTTGCAAAAGTATGTTCAGATAGTTGCAATGATTGCGTTGCCGGAATCCCTTTTTGGAAA
TGCAGCGTATGCCAAAACAATTTTTGTGCTCAAAAAGCAAGACGAACAAGCTATTCAGTCATTTGTTTATGCTTTGACTG
ATTTACAAAATCAAGCTGCCTTATTGACTTTTAGCGAAAAATTCCAAAATTGGAGGCAAGAAAGTGAAATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (69-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	60.635	99.369	0.603
comYH	Streptococcus mutans UA159	60.317	99.369	0.599