Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   DQN75_RS01390 Genome accession   NZ_LS483420
Coordinates   250882..251643 (+) Length   253 a.a.
NCBI ID   WP_002986029.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13739     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 245882..256643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN75_RS01375 (NCTC13739_00275) - 246140..247708 (-) 1569 WP_002991130.1 ABC transporter substrate-binding protein/permease -
  DQN75_RS01380 (NCTC13739_00276) - 247906..249831 (+) 1926 WP_111684559.1 DUF2207 domain-containing protein -
  DQN75_RS01385 (NCTC13739_00277) - 249897..250736 (+) 840 WP_111684561.1 undecaprenyl-diphosphate phosphatase -
  DQN75_RS01390 (NCTC13739_00278) mecA 250882..251643 (+) 762 WP_002986029.1 adaptor protein MecA Regulator
  DQN75_RS01395 (NCTC13739_00279) - 251650..252819 (+) 1170 WP_111684563.1 glycosyltransferase family 4 protein -
  DQN75_RS01400 (NCTC13739_00280) sufC 252941..253711 (+) 771 WP_002986023.1 Fe-S cluster assembly ATPase SufC -
  DQN75_RS01405 (NCTC13739_00281) sufD 253806..255068 (+) 1263 WP_047235146.1 Fe-S cluster assembly protein SufD -
  DQN75_RS01410 (NCTC13739_00282) - 255099..256325 (+) 1227 WP_111684565.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29051.72 Da        Isoelectric Point: 4.1622

>NTDB_id=1140987 DQN75_RS01390 WP_002986029.1 250882..251643(+) (mecA) [Streptococcus pyogenes strain NCTC13739]
MEMKQISETTLKITISMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFVTKSEI
NKDINLEDLAEFGDMSQMTPEDFFKSLEQSMREKGDVKAHEKLEKIEEIMEDVVEATLANQSEAADPSTNHESEPLDYVH
YVLDFSTITEAVAFAKTIDFSIEASELYKGSNCYHMTILLDVQQQPSYFANVMYARLIEHANPGSKTRAYLQEHGLQLML
DGAVEQLQKIELG

Nucleotide


Download         Length: 762 bp        

>NTDB_id=1140987 DQN75_RS01390 WP_002986029.1 250882..251643(+) (mecA) [Streptococcus pyogenes strain NCTC13739]
ATGGAAATGAAACAAATTAGCGAGACAACGCTAAAAATAACAATTAGTATGGACGATTTAGAAGAAAGAGGAATGGAGTT
GAAAGATTTCTTGATTCCTCAAGAAAAAACAGAAGAGTTTTTCTATTCTGTGATGGACGAACTCGATCTTCCAGATAATT
TTAAAGATAGTGGTATGCTTAGTTTTCGAGTGACTCCACGCAAGGACCGTCTAGATGTTTTTGTTACCAAATCTGAGATA
AATAAAGATATTAATCTTGAAGATTTAGCAGAGTTTGGTGATATGTCCCAAATGACTCCGGAAGATTTTTTCAAGAGCTT
GGAGCAATCCATGCGTGAAAAGGGAGATGTCAAAGCTCATGAAAAATTAGAAAAAATTGAAGAGATAATGGAAGATGTTG
TTGAAGCTACTCTAGCTAATCAGTCTGAGGCGGCTGATCCATCAACTAATCATGAGTCAGAACCTTTAGACTATGTCCAT
TATGTATTGGATTTTTCAACGATTACAGAGGCAGTGGCTTTTGCTAAAACGATTGATTTTTCGATAGAAGCTTCAGAGTT
ATATAAGGGGAGCAACTGCTACCATATGACTATTTTATTAGATGTTCAGCAACAACCATCTTATTTTGCGAATGTCATGT
ATGCGAGATTGATTGAGCATGCAAACCCTGGATCAAAAACAAGAGCTTATTTACAAGAGCATGGCTTACAATTGATGCTT
GATGGTGCTGTTGAGCAATTACAAAAGATTGAGTTGGGATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-247)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus mutans UA159

63.2

98.814

0.625
  mecA Streptococcus thermophilus LMD-9

56.225

98.419

0.553
  mecA Streptococcus thermophilus LMG 18311

55.422

98.419

0.545
  mecA Streptococcus pneumoniae Rx1

48.235

100

0.486
  mecA Streptococcus pneumoniae D39

48.235

100

0.486
  mecA Streptococcus pneumoniae R6

48.235

100

0.486
  mecA Streptococcus pneumoniae TIGR4

48.235

100

0.486

Multiple sequence alignment