Detailed information NTG1140956

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQM62_RS05480
• Genome accession: NZ_LS483418
• Coordinates: 1084908..1085849 (-)
• Length: 313 a.a.
• NCBI ID: WP_012027201.1
• Uniprot ID: A0A2K1T0X9
• Organism: Streptococcus suis strain NCTC10234
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1079908..1090849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM62_RS05455 (NCTC10234_01075)	prsA	1080013..1081014 (-)	1002	WP_002938100.1	peptidylprolyl isomerase PrsA	-
DQM62_RS05460 (NCTC10234_01076)	-	1081075..1081794 (-)	720	WP_009910106.1	O-methyltransferase	-
DQM62_RS05465 (NCTC10234_01077)	-	1081869..1082417 (-)	549	WP_002938103.1	DUF6630 family protein	-
DQM62_RS05470 (NCTC10234_01078)	-	1082433..1082873 (-)	441	WP_012775191.1	hypothetical protein	-
DQM62_RS05475 (NCTC10234_01079)	pepF	1082875..1084677 (-)	1803	WP_012027200.1	oligoendopeptidase F	Regulator
DQM62_RS05480 (NCTC10234_01080)	coiA	1084908..1085849 (-)	942	WP_012027201.1	competence protein CoiA	Machinery gene
DQM62_RS05485 (NCTC10234_01081)	metG	1085913..1087916 (-)	2004	WP_012775442.1	methionine--tRNA ligase	-
DQM62_RS05490 (NCTC10234_01082)	-	1088072..1088665 (+)	594	WP_012027204.1	DUF1361 domain-containing protein	-
DQM62_RS05500 (NCTC10234_01083)	-	1088966..1090003 (+)	1038	WP_012027206.1	3-deoxy-7-phosphoheptulonate synthase	-

Sequence

Protein

• Length: 313 a.a.
• Molecular weight: 36261.73 Da
• Isoelectric Point: 7.4147

>NTDB_id=1140956 DQM62_RS05480 WP_012027201.1 1084908..1085849(-) (coiA) [Streptococcus suis strain NCTC10234]
MLVALDEDGQVFNVLENPAPQGSFSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENESAQHLSLKSCLYRWLVNAEQ
VELEKCLTSIGQVADLFVNNSLALEVQCSGLPISRLQLRTQAYSEAGYQVLWLLGKDLWLKERLTNLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLDILRLPFAKQALSHLTCPLDRDLPRYIAQQLYYKSPNWL
ALQAESYSRGENLLTKTAEEWYPHIRLPRSAIGFAQIQKDLTLVYQDFDQYYGNIEDKQKQVLYPPIIYRKPM

Nucleotide

• Length: 942 bp

>NTDB_id=1140956 DQM62_RS05480 WP_012027201.1 1084908..1085849(-) (coiA) [Streptococcus suis strain NCTC10234]
ATGTTAGTAGCACTTGATGAAGATGGGCAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGCAGTTTTTCCTGTCC
AGGTTGTGGAGGACTTGTCCGATACAAATCAGGAAAAGTTCTGCGTTCGCACTTTGCCCATGTAACCCTGCGGGACTGCC
ACTATTTTTCCGAGAATGAGTCCGCTCAGCACCTGTCCCTCAAGTCTTGTCTGTACAGGTGGTTAGTCAATGCCGAACAA
GTTGAACTTGAAAAATGCTTGACTAGTATAGGACAGGTCGCTGATTTATTTGTCAATAATAGTCTAGCTTTGGAAGTTCA
ATGTTCCGGTCTGCCCATTTCTCGTTTGCAGCTGAGGACGCAAGCCTATAGTGAGGCTGGTTATCAGGTTCTTTGGTTGC
TTGGCAAGGATTTGTGGCTCAAGGAACGACTGACCAATTTGCACAAGCAATTTCTCTCTTTTAGTATGAATATGGGGTTT
CACCTCTGGGAATTGGATGATGAGAAGAAGGAATTGCGTCTTCGTTACCTTATTCACGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGGACATCTTGCGTCTGCCATTTGCCAAGCAAGCTTTAT
CGCATCTTACTTGCCCGTTAGATAGGGATTTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAATTGGTTG
GCCCTGCAGGCAGAGTCTTATAGCCGAGGGGAGAATTTGCTGACAAAGACGGCAGAAGAATGGTACCCCCACATCCGTCT
GCCCCGCTCTGCCATTGGCTTTGCCCAAATACAAAAAGATTTAACCCTAGTTTATCAGGATTTTGACCAGTATTACGGCA
ATATTGAAGACAAGCAGAAACAGGTTCTATATCCACCTATAATTTATAGAAAACCAATGTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (21-230)

3D structure

• AlphaFold DB: A0A2K1T0X9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	53.205	99.681	0.53
coiA	Streptococcus pneumoniae TIGR4	51.603	99.681	0.514
coiA	Streptococcus pneumoniae Rx1	51.603	99.681	0.514
coiA	Streptococcus pneumoniae D39	51.603	99.681	0.514
coiA	Streptococcus pneumoniae R6	51.603	99.681	0.514
coiA	Lactococcus lactis subsp. cremoris KW2	42.5	100	0.435