Detailed information NTG1140345

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQN23_RS02940
• Genome accession: NZ_LS483403
• Coordinates: 543272..544234 (+)
• Length: 320 a.a.
• NCBI ID: WP_111712680.1
• Uniprot ID: -
• Organism: Streptococcus lutetiensis strain NCTC13774
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 538272..549234

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN23_RS02910 (NCTC13774_00598)	-	538405..539016 (+)	612	WP_020916426.1	superoxide dismutase	-
DQN23_RS02915 (NCTC13774_00599)	-	539118..539843 (+)	726	WP_043894998.1	YebC/PmpR family DNA-binding transcriptional regulator	-
DQN23_RS02920 (NCTC13774_00600)	queA	539894..540922 (-)	1029	WP_020916428.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
DQN23_RS02925 (NCTC13774_00601)	-	541086..541592 (+)	507	WP_058833169.1	VIT1/CCC1 transporter family protein	-
DQN23_RS02930 (NCTC13774_00602)	nagB	541725..542432 (+)	708	WP_111712678.1	glucosamine-6-phosphate deaminase	-
DQN23_RS02935 (NCTC13774_00603)	-	542506..543222 (+)	717	WP_111712679.1	pseudouridine synthase	-
DQN23_RS02940 (NCTC13774_00604)	coiA	543272..544234 (+)	963	WP_111712680.1	competence protein CoiA	Machinery gene
DQN23_RS02945 (NCTC13774_00605)	pepF	544234..546036 (+)	1803	WP_020916433.1	oligoendopeptidase F	Regulator
DQN23_RS02950 (NCTC13774_00606)	-	546105..546602 (+)	498	WP_111713073.1	GNAT family N-acetyltransferase	-
DQN23_RS02955 (NCTC13774_00607)	-	546622..547233 (+)	612	WP_020916435.1	HAD-IA family hydrolase	-
DQN23_RS02960 (NCTC13774_00608)	-	547281..547982 (+)	702	WP_111712681.1	O-methyltransferase	-
DQN23_RS02965 (NCTC13774_00609)	-	548052..549113 (+)	1062	WP_111712682.1	peptidyl-prolyl cis-trans isomerase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37667.95 Da
• Isoelectric Point: 9.1387

>NTDB_id=1140345 DQN23_RS02940 WP_111712680.1 543272..544234(+) (coiA) [Streptococcus lutetiensis strain NCTC13774]
MLSALDEKDRLVSLLDEISEKQTFTCPACHSPVRLRHGQIMRPHFAHVSLKNCDFYSENESDEHLQLKAALYQALSQSEN
VTVEAVLPELHQVADVLVNDNLALEVQCSRLSEKRLRERTTSYRKAGFNVLWLLGETLWLGERLTPLQRHFLYFSQNMGF
HLWELDAKQRLVRLHYLIYEDWHGKVHYLTKSCSLSGNLMAFFRLPYQKQKLSTYDVNQDSNLLSYIQRQLSSRNTSWLK
RQEKAYLQGKNLLTLPLSAYFPQVRPPEVKDGFCQISQDLSDFYETFRRYYQNQSEKGVQRLYPPAYYGRMVNNAKKRRT

Nucleotide

• Length: 963 bp

>NTDB_id=1140345 DQN23_RS02940 WP_111712680.1 543272..544234(+) (coiA) [Streptococcus lutetiensis strain NCTC13774]
ATGCTGTCTGCTCTTGATGAAAAAGATCGTTTGGTCTCCTTGTTAGATGAGATTTCTGAAAAGCAAACTTTTACTTGTCC
AGCCTGTCATTCACCAGTTCGACTGAGACATGGTCAGATTATGCGTCCGCATTTTGCACATGTGTCGCTTAAAAATTGTG
ATTTTTATAGTGAAAATGAAAGTGACGAACATTTGCAGTTAAAAGCAGCACTTTACCAAGCTCTTTCACAAAGTGAAAAT
GTAACCGTAGAAGCTGTCTTGCCAGAGCTGCATCAGGTTGCAGATGTTTTGGTCAATGATAACTTAGCTCTGGAAGTTCA
GTGTTCTAGGCTATCAGAAAAACGTCTCAGAGAACGAACGACTTCTTATCGCAAGGCGGGCTTTAATGTTTTATGGCTTT
TGGGAGAAACATTATGGCTTGGTGAGCGCTTAACGCCCCTACAGCGACACTTTCTTTACTTTTCACAGAATATGGGGTTT
CATCTGTGGGAGTTAGATGCTAAGCAAAGGCTTGTTCGACTACATTATTTAATTTATGAAGATTGGCACGGTAAAGTGCA
TTATTTGACGAAAAGCTGCTCGCTCTCAGGAAACTTAATGGCATTTTTCAGACTTCCTTATCAAAAACAAAAGCTCTCAA
CTTACGACGTTAATCAAGACTCAAATTTATTAAGCTATATTCAAAGGCAACTATCTTCTCGAAATACTTCTTGGTTAAAG
CGCCAAGAAAAGGCTTATTTACAAGGGAAAAATCTTCTCACACTGCCTTTGTCAGCTTATTTTCCGCAAGTTAGGCCCCC
AGAAGTTAAGGATGGCTTTTGTCAAATTTCACAAGACTTATCAGACTTTTATGAGACCTTTAGGCGTTATTATCAAAATC
AAAGTGAAAAAGGTGTTCAAAGACTTTACCCGCCAGCTTATTATGGTAGAATGGTTAATAATGCCAAGAAAAGGAGAACA
TAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (18-264)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	51.78	96.563	0.5
coiA	Streptococcus pneumoniae Rx1	51.133	96.563	0.494
coiA	Streptococcus pneumoniae D39	51.133	96.563	0.494
coiA	Streptococcus pneumoniae R6	51.133	96.563	0.494
coiA	Streptococcus pneumoniae TIGR4	50.809	96.563	0.491
coiA	Lactococcus lactis subsp. cremoris KW2	42.042	100	0.437