Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DQM67_RS10245 Genome accession   NZ_LS483383
Coordinates   1999378..2000139 (+) Length   253 a.a.
NCBI ID   WP_005591379.1    Uniprot ID   A0AAV3EFY5
Organism   Streptococcus cristatus ATCC 51100 strain NCTC 12479     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1994378..2005139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM67_RS10215 (NCTC12479_01980) comE/comE2 1994923..1995666 (-) 744 WP_005591384.1 competence system response regulator transcription factor ComE Regulator
  DQM67_RS10220 (NCTC12479_01981) comD/comD1 1995663..1997009 (-) 1347 WP_376738740.1 sensor histidine kinase Regulator
  DQM67_RS10225 (NCTC12479_01982) comC 1997032..1997160 (-) 129 WP_005591382.1 bacteriocin Regulator
  DQM67_RS10235 (NCTC12479_01984) rlmH 1997455..1997934 (-) 480 WP_005591381.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQM67_RS10240 (NCTC12479_01985) htrA 1998137..1999315 (+) 1179 WP_005591380.1 S1C family serine protease Regulator
  DQM67_RS10245 (NCTC12479_01986) spo0J 1999378..2000139 (+) 762 WP_005591379.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 253 a.a.        Molecular weight: 29302.17 Da        Isoelectric Point: 9.5364

>NTDB_id=1139545 DQM67_RS10245 WP_005591379.1 1999378..2000139(+) (spo0J) [Streptococcus cristatus ATCC 51100 strain NCTC 12479]
MENYQYIPLKDIRTNPYQPRKSFSQEKINELAASIKENGIIQPIILRKSSLFGYEILAGERRFRAAKIAGLENIPALIKD
LSDDDMMKQAIIENLQREDLNPIEEAESYQHLIEKGLTHEEIAKIMGKSRPYISNLVRLLQLPAFMMDAVKEEMISQGHA
RLLIPLKKEEQVFWLDKIIQDNLSVRALELSLQKTKKAKTKKNKEIFAHSEEEKLKKILGLNVTIHLKNPSKGKIIIPFE
NEEEYQRIINSLK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=1139545 DQM67_RS10245 WP_005591379.1 1999378..2000139(+) (spo0J) [Streptococcus cristatus ATCC 51100 strain NCTC 12479]
ATGGAAAATTATCAATACATACCACTAAAAGACATTCGAACCAATCCTTATCAGCCTAGAAAAAGCTTTTCTCAAGAAAA
AATAAATGAATTGGCAGCTTCTATTAAAGAAAATGGAATTATCCAGCCCATTATTTTGAGAAAATCTTCCTTATTTGGTT
ACGAAATTTTAGCAGGTGAAAGACGATTCCGAGCTGCTAAGATTGCTGGCTTAGAAAACATTCCTGCCCTCATTAAAGAC
CTATCTGACGATGACATGATGAAGCAAGCCATCATCGAGAATTTGCAAAGAGAAGATCTCAATCCGATTGAAGAAGCGGA
ATCCTATCAGCATCTGATTGAGAAAGGATTGACCCATGAAGAAATTGCAAAAATCATGGGAAAATCTCGGCCTTACATCA
GTAATCTTGTCCGCTTGTTACAGCTGCCAGCTTTTATGATGGACGCTGTCAAAGAGGAAATGATTTCGCAAGGGCATGCT
CGTCTCCTCATTCCACTCAAAAAGGAAGAACAAGTCTTTTGGCTGGACAAAATCATTCAAGATAATTTATCCGTTCGTGC
TCTTGAACTTTCATTACAAAAGACTAAAAAGGCAAAAACTAAGAAGAACAAAGAAATTTTTGCCCATTCAGAAGAAGAAA
AACTGAAAAAAATCCTTGGCCTCAATGTCACTATTCACTTAAAAAATCCTTCAAAAGGAAAGATCATTATTCCTTTTGAA
AATGAGGAAGAGTACCAAAGAATTATAAACAGCCTGAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

52.569

100

0.526


Multiple sequence alignment