Detailed information NTG1139225

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: DQM97_RS04625
• Genome accession: NZ_LS483378
• Coordinates: 963673..965820 (-)
• Length: 715 a.a.
• NCBI ID: WP_002961290.1
• Uniprot ID: -
• Organism: Streptococcus sobrinus strain NCTC12279
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 958673..970820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM97_RS04600 (NCTC12279_00923)	-	958825..959354 (+)	530	Protein_862	YbaK/EbsC family protein	-
DQM97_RS04605 (NCTC12279_00924)	-	960060..960563 (+)	504	WP_002961281.1	phosphatase PAP2 family protein	-
DQM97_RS04610 (NCTC12279_00925)	-	960677..961420 (+)	744	WP_002961283.1	response regulator transcription factor	-
DQM97_RS04615 (NCTC12279_00926)	-	961423..962769 (+)	1347	WP_002961285.1	sensor histidine kinase	-
DQM97_RS04620 (NCTC12279_00927)	-	962887..963660 (-)	774	WP_002961287.1	HlyD family efflux transporter periplasmic adaptor subunit	-
DQM97_RS04625 (NCTC12279_00928)	comA/nlmT	963673..965820 (-)	2148	WP_002961290.1	peptide cleavage/export ABC transporter	Regulator
DQM97_RS11005 (NCTC12279_00929)	-	966138..966353 (+)	216	WP_002961293.1	Blp family class II bacteriocin	-
DQM97_RS04635 (NCTC12279_00930)	-	967003..967431 (+)	429	WP_002961294.1	hypothetical protein	-
DQM97_RS04640 (NCTC12279_00931)	-	967501..967644 (+)	144	WP_028798426.1	hypothetical protein	-
DQM97_RS04645 (NCTC12279_00932)	-	967670..968074 (+)	405	WP_028798427.1	hypothetical protein	-
DQM97_RS04650 (NCTC12279_00933)	-	968124..969158 (+)	1035	WP_002961298.1	thiol reductase thioredoxin	-
DQM97_RS04655 (NCTC12279_00934)	tnpA	969440..969865 (+)	426	WP_019773605.1	IS200/IS605 family transposase	-
DQM97_RS04665 (NCTC12279_00935)	-	970271..970624 (+)	354	WP_019786472.1	hypothetical protein	-

Sequence

Protein

• Length: 715 a.a.
• Molecular weight: 80593.89 Da
• Isoelectric Point: 8.8256

>NTDB_id=1139225 DQM97_RS04625 WP_002961290.1 963673..965820(-) (comA/nlmT) [Streptococcus sobrinus strain NCTC12279]
MNFYKFVPQIDARDCGVAALASIARHYGANYSLAHLRELAKTDKEGTTALGIVEAAQTMGFETRAVRADMSLFEEEEIPY
PFIAHINKKGRLQHYYVVYKAKKNHLIIGDPDPSVKVTKMSKERFEQEWDGISIFLAPEPAYKPHKDKKNGLLSFIPIIL
KQKGLIFQISLASLLMTLIDILGSYYLQGILDSYIPNQMTSTLTIVSLGLVITYVIQQIMAFSRDYLLTVLSQRLSIDVI
LAYIRHIFSLPMSFFATRRTGEITSRFSDANSIIDALASTILSIFLDCFILIIIGAVLLLQNANLFLLTLLSIPIYTIII
LVFMKPFEKMNQDVMEANSMVSSAIIEDINGMETIKSLTSEDTRYRNVDNEFVDYLDKSFKRHKYEILQTSLKKGAQLIL
NVAILWFGSTLVMVNKISIGQLVAYNSLLTYFTNPLENIINLQTKLQSAKVANNRLNEVYLVSSEFDQKTTKVNQEALPG
DIVFSDVSYKYGFGRDTLTDINLKIAKGSKISLVGISGSGKTTLAKLIVNFFQPYKGEITIKSLNTNLLDKRLLRKYINY
LPQQPYVFSGSILENLTLGADESVSQEDIMKACEMAEIRRDIEQMPLGYQTELSDGAGLSGGQKQRIALARALLTKSPIM
VLDEATSGLDVLTEKKVIDNLMKMTEKTIIFVAHRLSISERTDKIVVLDQRRIIETGPHQDLLKKQGFYYQLFNK

Nucleotide

• Length: 2148 bp

>NTDB_id=1139225 DQM97_RS04625 WP_002961290.1 963673..965820(-) (comA/nlmT) [Streptococcus sobrinus strain NCTC12279]
ATGAATTTTTACAAATTTGTTCCTCAGATTGATGCCAGAGACTGTGGAGTTGCTGCTCTCGCTTCTATCGCCCGTCATTA
CGGAGCAAACTATTCTTTAGCCCATTTGCGTGAACTGGCCAAGACGGATAAGGAGGGGACAACAGCTTTGGGTATCGTGG
AAGCTGCCCAGACCATGGGCTTTGAGACTCGGGCTGTCCGAGCTGATATGAGCCTTTTTGAAGAAGAGGAGATTCCCTAT
CCCTTTATCGCTCATATCAATAAAAAGGGCAGACTACAGCACTATTATGTGGTTTACAAGGCTAAGAAAAATCATCTGAT
TATCGGCGATCCCGATCCAAGTGTCAAAGTAACCAAGATGAGTAAAGAAAGGTTTGAACAAGAATGGGATGGTATTTCCA
TTTTCCTAGCTCCAGAGCCAGCCTACAAACCCCATAAGGATAAGAAAAATGGTCTATTGAGTTTCATCCCAATCATTCTC
AAGCAAAAGGGGCTTATCTTCCAGATTAGTTTGGCCAGCCTTTTAATGACCTTGATTGATATCTTGGGCTCCTACTACTT
ACAAGGGATTCTAGATAGTTATATTCCCAATCAAATGACTTCAACCTTGACCATTGTCTCGCTCGGTCTGGTCATTACCT
ATGTTATTCAGCAAATTATGGCCTTCTCACGGGACTATCTCTTAACAGTTCTCAGTCAGAGGCTCAGTATTGATGTGATC
CTGGCTTATATCCGTCATATCTTTTCCTTGCCCATGTCTTTCTTTGCGACAAGGCGAACGGGGGAGATTACCTCACGTTT
TTCAGATGCCAATTCTATCATTGATGCTCTGGCCTCAACTATTTTGTCCATCTTCTTAGATTGTTTTATTTTAATTATTA
TCGGAGCTGTTCTGCTTCTGCAAAACGCCAACCTCTTCCTCCTAACTTTGCTGTCTATCCCAATCTACACAATTATCATC
CTTGTCTTTATGAAACCCTTTGAAAAAATGAACCAAGATGTCATGGAAGCCAACAGTATGGTTAGCTCTGCTATCATTGA
AGATATCAACGGGATGGAAACCATCAAGTCGCTGACTAGTGAGGATACTCGCTACCGCAATGTTGATAATGAGTTTGTTG
ATTATCTAGATAAGTCCTTTAAACGCCACAAGTACGAAATTTTACAAACTTCCCTTAAAAAGGGAGCCCAGCTGATTTTA
AATGTCGCCATCCTCTGGTTTGGCTCAACACTGGTTATGGTCAATAAGATCTCCATTGGTCAACTCGTTGCCTATAATTC
TCTCTTAACCTACTTTACCAATCCGCTGGAAAACATCATCAACTTACAAACCAAGCTGCAATCGGCCAAAGTAGCCAATA
ATCGGCTCAATGAAGTTTACCTTGTTTCCTCGGAATTCGACCAGAAAACTACGAAAGTTAATCAGGAGGCTCTGCCTGGA
GATATTGTCTTTTCTGATGTCTCCTACAAATACGGGTTCGGTCGAGATACCCTGACCGACATTAACCTTAAAATTGCCAA
AGGTTCGAAAATCAGCTTGGTCGGTATCAGTGGCTCTGGGAAAACGACGCTGGCTAAACTGATTGTCAACTTTTTCCAAC
CCTACAAGGGAGAAATCACTATTAAGAGCCTAAATACCAACCTTTTGGATAAAAGGCTTCTTCGCAAATATATCAACTAC
CTACCTCAGCAACCTTATGTCTTTTCCGGAAGCATCTTAGAAAATTTGACTTTAGGTGCCGACGAGTCTGTCAGTCAAGA
GGACATCATGAAAGCCTGTGAGATGGCTGAAATCAGAAGAGATATCGAGCAAATGCCACTGGGTTATCAAACTGAGCTAT
CCGATGGGGCGGGACTCTCAGGTGGTCAAAAACAAAGGATAGCTCTGGCACGTGCCCTCCTGACAAAGTCACCGATTATG
GTCTTAGACGAAGCGACTAGCGGGCTAGACGTCTTAACAGAAAAAAAGGTCATTGACAACCTGATGAAGATGACCGAGAA
AACCATTATTTTTGTGGCCCACCGACTCAGCATTTCTGAGCGGACTGACAAAATTGTTGTTCTTGACCAGAGAAGAATTA
TTGAAACAGGTCCCCATCAGGATTTGCTTAAAAAGCAAGGCTTCTACTACCAACTTTTTAATAAATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (498-647)

• Peptidase C39 family (Peptidase_C39) (4-140)

• ABC transporter transmembrane region (ABC_membrane) (171-436)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	70.183	99.441	0.698
comA	Streptococcus mitis NCTC 12261	64.993	100	0.652
comA	Streptococcus gordonii str. Challis substr. CH1	64.714	100	0.649
comA	Streptococcus mitis SK321	64.714	100	0.649
comA	Streptococcus pneumoniae D39	64.435	100	0.646
comA	Streptococcus pneumoniae R6	64.435	100	0.646
comA	Streptococcus pneumoniae TIGR4	64.435	100	0.646
comA	Streptococcus pneumoniae Rx1	64.435	100	0.646