Detailed information NTG1139124

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQM54_RS07700
• Genome accession: NZ_LS483375
• Coordinates: 1556462..1557415 (-)
• Length: 317 a.a.
• NCBI ID: WP_111723973.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain NCTC3165
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1551462..1562415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM54_RS07680 (NCTC3165_01529)	-	1551969..1552454 (-)	486	WP_061602167.1	LURP-one-related/scramblase family protein	-
DQM54_RS07685 (NCTC3165_01531)	prsA	1552684..1553613 (-)	930	WP_096755052.1	peptidylprolyl isomerase PrsA	-
DQM54_RS07690 (NCTC3165_01532)	-	1553816..1554502 (-)	687	WP_111723971.1	O-methyltransferase	-
DQM54_RS07695 (NCTC3165_01533)	pepF	1554504..1556306 (-)	1803	WP_111723972.1	oligoendopeptidase F	Regulator
DQM54_RS07700 (NCTC3165_01534)	coiA	1556462..1557415 (-)	954	WP_111723973.1	competence protein CoiA	Machinery gene
DQM54_RS07705 (NCTC3165_01535)	-	1557501..1558673 (-)	1173	WP_111723974.1	MFS transporter	-
DQM54_RS07710 (NCTC3165_01536)	-	1558771..1560153 (-)	1383	WP_172455844.1	DUF1958 domain-containing protein	-
DQM54_RS07715 (NCTC3165_01537)	-	1560293..1561000 (-)	708	WP_061583073.1	glucosamine-6-phosphate deaminase	-
DQM54_RS07720 (NCTC3165_01538)	queA	1561308..1562336 (+)	1029	WP_111723975.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 37885.43 Da
• Isoelectric Point: 9.1210

>NTDB_id=1139124 DQM54_RS07700 WP_111723973.1 1556462..1557415(-) (coiA) [Streptococcus gordonii strain NCTC3165]
MFSARDKDGKVLHLLKESSVSKGEYFCPGCGGPVRLKQGKIMQPHFAHIRLSDCHYSVENESREHLNLKAALFRWANQAT
RVDVEVFLPDLQQVADVLVDERLALEVQCSSLSQDRLWERSHRYRQAGYQVLWFLGKKLWLRQTLTPLQKQFLYFSQNMG
FHIWELDEERKVLRLKYLIHEDLHGQLQYKEKEFPFERGELLDILRLPFSKQEMSSFLVKSDPDICHYIRQQLYYRNPKW
MKKQASYYQKGKNLLTMSREEFYPQVRPVRSDQPLCQISQDLSAYYKNFQRYYQHSPDKKYQIVYPPAFYASLDQSC

Nucleotide

• Length: 954 bp

>NTDB_id=1139124 DQM54_RS07700 WP_111723973.1 1556462..1557415(-) (coiA) [Streptococcus gordonii strain NCTC3165]
ATGTTTTCAGCACGTGATAAGGATGGGAAGGTTCTTCATCTATTAAAGGAGTCATCCGTTTCAAAAGGAGAATATTTTTG
CCCAGGGTGTGGAGGGCCTGTCCGTTTGAAGCAGGGGAAAATCATGCAACCTCATTTCGCACATATTCGTTTATCAGACT
GTCATTATAGTGTTGAAAATGAAAGTAGAGAACATCTGAACCTTAAGGCTGCCCTTTTTCGCTGGGCTAATCAAGCGACA
AGAGTAGATGTCGAAGTGTTTTTGCCAGACTTGCAGCAAGTGGCGGATGTCTTAGTTGATGAGCGCCTTGCTTTAGAAGT
TCAGTGTAGCAGTCTTTCCCAAGATAGACTTTGGGAGCGAAGTCATAGATATCGCCAAGCTGGCTATCAAGTTCTTTGGT
TCCTGGGAAAGAAACTCTGGCTCAGGCAAACTCTGACACCCTTGCAGAAGCAATTCCTATATTTCAGTCAAAACATGGGT
TTTCATATCTGGGAATTGGACGAGGAAAGAAAGGTGCTAAGGCTGAAGTATTTGATTCATGAAGATCTTCATGGGCAACT
CCAGTATAAAGAAAAAGAATTTCCTTTTGAAAGAGGAGAATTGTTAGATATCTTACGATTGCCTTTTAGTAAGCAGGAAA
TGAGTAGTTTCTTAGTGAAGTCAGATCCTGATATTTGCCATTATATCCGACAGCAACTCTATTATCGAAATCCCAAGTGG
ATGAAAAAACAGGCCAGCTATTATCAAAAAGGAAAAAATCTTTTAACCATGTCTAGAGAAGAATTCTATCCTCAAGTGCG
CCCGGTTCGTTCAGACCAGCCCTTGTGTCAGATTTCCCAAGACCTATCTGCTTATTATAAAAACTTCCAGCGCTATTATC
AACATTCTCCAGATAAAAAGTACCAGATTGTCTACCCACCAGCCTTTTACGCAAGTTTAGATCAGTCTTGCTGA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-265)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	57.419	97.792	0.562
coiA	Streptococcus pneumoniae TIGR4	54.839	97.792	0.536
coiA	Streptococcus pneumoniae Rx1	54.839	97.792	0.536
coiA	Streptococcus pneumoniae D39	54.839	97.792	0.536
coiA	Streptococcus pneumoniae R6	54.839	97.792	0.536
coiA	Lactococcus lactis subsp. cremoris KW2	41.284	100	0.426