Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   DQM54_RS02945 Genome accession   NZ_LS483375
Coordinates   611639..613492 (+) Length   617 a.a.
NCBI ID   WP_111723392.1    Uniprot ID   -
Organism   Streptococcus gordonii strain NCTC3165     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 606639..618492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM54_RS02930 (NCTC3165_00580) fmt 608643..609578 (+) 936 WP_111723390.1 methionyl-tRNA formyltransferase -
  DQM54_RS02935 (NCTC3165_00581) rsmB 609568..610881 (+) 1314 WP_111723391.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  DQM54_RS02940 (NCTC3165_00582) - 610902..611642 (+) 741 WP_045506058.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  DQM54_RS02945 (NCTC3165_00583) stkP 611639..613492 (+) 1854 WP_111723392.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  DQM54_RS02950 (NCTC3165_00584) liaF 613665..614363 (+) 699 WP_061411226.1 cell wall-active antibiotics response protein LiaF -
  DQM54_RS02955 (NCTC3165_00585) - 614360..615361 (+) 1002 WP_111723393.1 sensor histidine kinase -
  DQM54_RS02960 (NCTC3165_00586) - 615363..615995 (+) 633 WP_070494100.1 response regulator transcription factor -
  DQM54_RS02965 (NCTC3165_00587) - 616083..617486 (+) 1404 WP_111723394.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  DQM54_RS02970 (NCTC3165_00588) - 617483..617869 (+) 387 WP_008808599.1 S1 RNA-binding domain-containing protein -

Sequence

Protein


Download         Length: 617 a.a.        Molecular weight: 67096.10 Da        Isoelectric Point: 6.6769

>NTDB_id=1139104 DQM54_RS02945 WP_111723392.1 611639..613492(+) (stkP) [Streptococcus gordonii strain NCTC3165]
MIQIGKIFAGRYKIIKQIGRGGMADVYLAKDLILDGEEVAVKVLRTNYQTDPIAVARFQREARAMADLDHPHIVRVTDIG
EEDGQQYLAMEYVAGLDLKRYIKEHSPLSNEEAVRIMGQILLAMRLAHARGIVHRDLKPQNVLLTPDGNAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATFQSDIYAMGIIFYEMLTGHIPYDGDSAVTIALQHFQKPLPSIIAENANVP
QSLENVIIKATAKKLTDRYQSVSDMYVDLSSCLSPERRNEKKLMFDDAVKADTKTLPKIPQVTPPVASRVNNDPATDVEQ
KAPQVAPPTKPKKKRHLRARYKVLLAAVFLVIAAFLALLYLTPSNKQVPDVTGKTVAEAREAIEKVNLKVGEEIEENSDE
VASGMIIRTDPVAGTQRKEGSTVNLVVSKGAKTLIMEDYTGQTTAQAVERLTDVLKVPKNNIKVEEVETNDAEEGTIFEQ
APAAGATYDLTSNTKIVLKVAKAVSTIEMPNFGSLQYTYANARNYLISLGIPSSNIERVVDRSVVSSQSDLVTSQSPATG
PVNPKKVKVTLYVTEATTQSSSSSSSSNSNSSSSSKNTSSSSSSEDETSASSSTHSD

Nucleotide


Download         Length: 1854 bp        

>NTDB_id=1139104 DQM54_RS02945 WP_111723392.1 611639..613492(+) (stkP) [Streptococcus gordonii strain NCTC3165]
ATGATTCAAATCGGCAAAATTTTTGCCGGGCGATATAAAATCATCAAACAAATTGGCCGAGGTGGGATGGCAGATGTCTA
TCTTGCCAAGGATTTGATTTTAGATGGTGAAGAAGTGGCGGTTAAGGTTCTTAGAACCAATTACCAGACGGATCCTATCG
CTGTTGCACGTTTCCAACGAGAAGCGCGTGCCATGGCGGATTTGGACCATCCACATATCGTTCGTGTCACCGATATTGGT
GAAGAAGACGGCCAGCAATATTTGGCTATGGAATATGTAGCTGGCTTGGATCTCAAACGTTATATCAAGGAACACTCTCC
TTTGTCGAACGAAGAGGCCGTTCGAATTATGGGGCAAATTCTTTTAGCCATGCGTTTGGCACATGCTCGTGGGATTGTTC
ACCGAGATTTGAAACCGCAAAACGTTCTCCTGACTCCAGATGGAAATGCTAAGGTAACGGACTTTGGGATTGCGGTTGCC
TTTGCAGAAACAAGTTTGACCCAAACAAATTCCATGCTTGGTAGTGTCCATTATTTGTCTCCTGAGCAGGCGCGTGGTTC
GAAAGCAACTTTCCAAAGTGATATTTATGCGATGGGGATCATCTTTTATGAGATGCTGACTGGTCATATTCCTTATGATG
GGGATAGTGCAGTGACGATCGCTCTGCAACATTTCCAAAAACCATTGCCGTCCATTATTGCTGAAAATGCCAATGTTCCG
CAGTCTTTGGAAAATGTTATTATTAAGGCTACTGCTAAAAAGCTGACAGATCGATATCAGAGTGTTTCGGATATGTATGT
AGATCTGTCTAGTTGCCTGTCACCTGAACGACGGAATGAAAAGAAACTGATGTTTGATGACGCGGTAAAAGCGGATACTA
AAACACTTCCGAAGATTCCACAAGTCACACCTCCTGTAGCTTCTAGAGTAAATAATGATCCAGCTACAGATGTTGAACAG
AAAGCCCCTCAAGTTGCACCGCCAACAAAACCTAAGAAAAAGCGTCATTTGAGAGCGAGATACAAAGTTTTGTTAGCTGC
AGTATTTCTTGTCATTGCTGCTTTTCTAGCTTTGCTCTATCTAACACCATCTAATAAGCAGGTTCCAGATGTTACTGGCA
AGACAGTTGCTGAAGCTAGAGAAGCGATTGAAAAAGTCAATTTAAAAGTTGGCGAAGAAATAGAAGAGAATAGTGATGAA
GTAGCTTCTGGAATGATTATTCGAACAGATCCAGTGGCAGGGACTCAGAGAAAGGAAGGCAGTACGGTTAATTTAGTTGT
TTCTAAGGGAGCTAAAACGCTGATCATGGAAGACTATACTGGTCAAACTACTGCCCAAGCTGTTGAGAGACTCACTGATG
TTCTAAAAGTTCCAAAAAACAATATTAAAGTTGAAGAAGTTGAAACAAACGATGCAGAAGAAGGAACAATTTTTGAACAG
GCACCAGCTGCGGGAGCTACCTATGATCTCACTTCAAATACGAAGATTGTTTTAAAAGTAGCCAAAGCAGTATCAACGAT
TGAAATGCCAAACTTTGGTAGCCTTCAATATACTTATGCAAACGCTCGAAATTATCTGATTTCTCTAGGAATTCCATCTA
GCAACATTGAAAGAGTCGTGGATCGTTCAGTTGTGTCGAGTCAATCTGATTTGGTGACATCACAATCTCCAGCAACTGGA
CCAGTTAATCCTAAGAAGGTAAAAGTAACCTTATATGTAACTGAAGCAACTACTCAAAGTTCAAGTTCTAGCTCAAGTTC
GAATTCTAACTCCTCATCAAGTAGTAAGAATACGTCATCGTCAAGCTCTTCAGAGGATGAAACTTCAGCATCAAGTTCGA
CACATAGTGATTAA

Domains

Predicted by InterproScan.

PASTA domain (PASTA)

(435-502)

PASTA domain (PASTA)

(367-429)

PASTA domain (PASTA)

(508-574)

Protein kinase domain (Pkinase)

(12-243)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

70.577

84.279

0.595
  stkP Streptococcus pneumoniae D39

70.385

84.279

0.593
  stkP Streptococcus pneumoniae R6

70.385

84.279

0.593
  stkP Streptococcus pneumoniae Rx1

70.192

84.279

0.592
  pknB Streptococcus mutans UA159

57.941

92.869

0.538
  stkP/pknB Streptococcus salivarius strain HSISS4

57.847

88.817

0.514

Multiple sequence alignment