Detailed information NTG0113899

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: Q426_RS04290
• Genome accession: NZ_CP006770
• Coordinates: 908087..908761 (-)
• Length: 224 a.a.
• NCBI ID: WP_012515548.1
• Uniprot ID: B4U2R0
• Organism: Streptococcus equi subsp. zooepidemicus CY
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 903087..913761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q426_RS04250 (Q426_04530)	-	903493..903819 (-)	327	WP_014622820.1	hypothetical protein	-
Q426_RS04255 (Q426_04535)	-	903989..904408 (-)	420	WP_014622819.1	hypothetical protein	-
Q426_RS04260 (Q426_04540)	-	904424..904675 (-)	252	WP_014622818.1	hypothetical protein	-
Q426_RS04265 (Q426_04545)	-	904677..905060 (-)	384	WP_038674323.1	hypothetical protein	-
Q426_RS04270	-	904984..905274 (-)	291	WP_014622816.1	hypothetical protein	-
Q426_RS04275 (Q426_04550)	-	905284..905691 (-)	408	WP_014622815.1	hypothetical protein	-
Q426_RS10310 (Q426_04555)	-	905707..905883 (-)	177	WP_014622814.1	hypothetical protein	-
Q426_RS04280 (Q426_04560)	-	905965..906399 (-)	435	WP_012678015.1	hypothetical protein	-
Q426_RS04285 (Q426_04565)	ciaH	906784..908094 (-)	1311	WP_014622812.1	sensor histidine kinase	Regulator
Q426_RS04290 (Q426_04570)	ciaR	908087..908761 (-)	675	WP_012515548.1	response regulator transcription factor	Regulator
Q426_RS04295 (Q426_04575)	-	909179..911715 (-)	2537	Protein_851	M1 family metallopeptidase	-
Q426_RS04300 (Q426_04580)	phoU	911949..912602 (-)	654	WP_012678018.1	phosphate signaling complex protein PhoU	-
Q426_RS04305 (Q426_04585)	pstB	912673..913431 (-)	759	WP_038674325.1	phosphate ABC transporter ATP-binding protein PstB	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 25541.52 Da
• Isoelectric Point: 4.5644

>NTDB_id=113899 Q426_RS04290 WP_012515548.1 908087..908761(-) (ciaR) [Streptococcus equi subsp. zooepidemicus CY]
MIKLLLVEDDLSLSNSIFDFLDDFADVTQVFDGDEGLYEAESGIYDLILLDLMLPEKDGFQVLKALREKDIKIPVLIMTA
KESIDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRVGKFNDKSLKFGNLTVDTTRKEVQVNGQAIELLGKELDLLIY
ILQNQNVILPKSQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTDFVNHLQTLRSVGYILKANE

Nucleotide

• Length: 675 bp

>NTDB_id=113899 Q426_RS04290 WP_012515548.1 908087..908761(-) (ciaR) [Streptococcus equi subsp. zooepidemicus CY]
ATGATAAAACTATTATTAGTAGAAGACGATTTAAGCTTATCAAATTCTATCTTTGATTTTTTAGATGACTTTGCTGATGT
GACGCAGGTTTTTGATGGTGACGAAGGACTCTATGAGGCAGAAAGCGGTATTTATGATTTGATTCTGTTAGATTTGATGC
TGCCTGAAAAGGATGGCTTTCAAGTGTTAAAAGCCTTACGTGAAAAAGACATCAAAATTCCCGTCTTGATCATGACTGCC
AAAGAAAGCATCGATGACAAGGGGCATGGCTTTGAGCTTGGTGCTGATGACTATTTAACTAAGCCCTTTTACCTAGAAGA
ATTAAAAATGCGGATTCAGGCCTTGCTTAAGCGTGTAGGAAAGTTTAATGACAAGAGCCTTAAATTTGGCAACTTGACTG
TAGATACTACCCGTAAAGAGGTACAGGTCAATGGGCAGGCCATAGAGCTATTAGGCAAGGAGCTTGATTTACTAATCTAT
ATCCTTCAAAATCAAAATGTTATTTTGCCAAAATCACAAATTTTTGATCGTATCTGGGGCTTTGATAGTGATACCACTAT
CTCTGTTGTAGAGGTCTATGTCTCTAAAATTCGTAAGAAGCTTAAGGGGACAGACTTTGTTAATCATCTTCAAACCTTGA
GAAGTGTAGGATATATCTTAAAAGCTAATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (5-112)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

3D structure

• AlphaFold DB: B4U2R0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	84.615	98.661	0.835
ciaR	Streptococcus pneumoniae Rx1	80.543	98.661	0.795
ciaR	Streptococcus pneumoniae D39	80.543	98.661	0.795
ciaR	Streptococcus pneumoniae R6	80.543	98.661	0.795
ciaR	Streptococcus pneumoniae TIGR4	80.543	98.661	0.795
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.428	100	0.393
covR	Streptococcus salivarius strain HSISS4	35.841	100	0.362