Detailed information NTG1138160

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DQL13_RS05020
• Genome accession: NZ_LS483354
• Coordinates: 1054738..1055583 (+)
• Length: 281 a.a.
• NCBI ID: WP_012515603.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC11606
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1049738..1060583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL13_RS05000 (NCTC11606_00997)	-	1051221..1051853 (+)	633	WP_012515600.1	ABC transporter ATP-binding protein	-
DQL13_RS09980	-	1052260..1052496 (+)	237	Protein_951	DNA-binding protein	-
DQL13_RS05010 (NCTC11606_00998)	ylqF	1052865..1053719 (+)	855	WP_012515601.1	ribosome biogenesis GTPase YlqF	-
DQL13_RS05015 (NCTC11606_00999)	-	1053709..1054482 (+)	774	WP_037584167.1	ribonuclease HII	-
DQL13_RS05020 (NCTC11606_01000)	dprA	1054738..1055583 (+)	846	WP_012515603.1	DNA-processing protein DprA	Machinery gene
DQL13_RS05025 (NCTC11606_01001)	topA	1055684..1057816 (+)	2133	WP_021320765.1	type I DNA topoisomerase	-
DQL13_RS05030 (NCTC11606_01002)	-	1057931..1058578 (+)	648	WP_021320766.1	SatD family protein	-
DQL13_RS05035 (NCTC11606_01003)	-	1058599..1059312 (+)	714	WP_012515606.1	DUF3307 domain-containing protein	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31374.30 Da
• Isoelectric Point: 8.8428

>NTDB_id=1138160 DQL13_RS05020 WP_012515603.1 1054738..1055583(+) (dprA) [Streptococcus equi subsp. zooepidemicus strain NCTC11606]
MNNFELYKLKKAGLTNLNILNLIDYQQRNNKSLSLRDMAVVSCCKNPVLFIETYKQLNVALLKKEFNQFPSLSILDKQYP
LALREIYNPPVLLFYQGDLSLLEKPKLAVVGSRESSEIGTRSVYKIIKELKNHFVIVSGLARGIDTSAHLACLKAGGQTI
AVIGTGLDRYYPKENHQLQEFLSQRHLVLSEYGAGEAALSYHFPERNRIIAGLSRGVLVVEAKQRSGSLITCQLAMEEGR
DIFVVPDNILNGTSAGCLKLIKDGASCVTHGRDILSEYYYS

Nucleotide

• Length: 846 bp

>NTDB_id=1138160 DQL13_RS05020 WP_012515603.1 1054738..1055583(+) (dprA) [Streptococcus equi subsp. zooepidemicus strain NCTC11606]
ATGAACAATTTTGAACTTTATAAATTAAAAAAGGCTGGGCTGACTAATTTAAATATTCTTAACCTTATTGACTACCAGCA
GCGTAATAATAAGTCTCTATCCCTTAGAGATATGGCAGTGGTTTCTTGCTGCAAAAATCCAGTTTTATTTATTGAAACCT
ACAAGCAATTAAATGTCGCCTTGTTAAAAAAGGAATTCAATCAGTTTCCGAGCTTATCTATCCTAGATAAGCAATACCCA
TTGGCTCTGAGGGAAATCTACAATCCTCCTGTTTTACTCTTTTATCAAGGTGATTTAAGCCTGTTAGAAAAACCTAAGCT
GGCAGTCGTTGGATCTAGAGAATCCAGTGAAATTGGGACGCGGTCTGTTTATAAAATCATTAAAGAGCTTAAGAATCACT
TTGTCATTGTCAGCGGGCTTGCTAGAGGTATTGATACCAGTGCTCATCTCGCTTGCTTGAAAGCAGGTGGGCAAACCATA
GCTGTTATCGGGACTGGCCTAGATCGCTACTATCCAAAGGAAAATCACCAGCTACAGGAGTTTTTATCTCAGCGTCATCT
TGTGCTCAGTGAGTATGGAGCTGGAGAGGCCGCCTTGTCTTATCATTTCCCTGAAAGAAACCGTATTATCGCAGGTCTTA
GTCGAGGTGTCCTTGTTGTTGAGGCTAAGCAGCGCTCTGGCTCTTTGATTACCTGTCAGCTAGCTATGGAAGAGGGACGT
GATATTTTTGTCGTACCTGACAATATTCTTAATGGTACATCAGCGGGCTGTTTGAAGCTGATCAAAGATGGTGCCAGCTG
TGTCACTCATGGCAGAGACATTCTTTCAGAATACTACTATTCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	68.929	99.644	0.687
dprA/cilB/dalA	Streptococcus mitis SK321	59.286	99.644	0.591
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae D39	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae R6	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	58.571	99.644	0.584
dprA	Lactococcus lactis subsp. cremoris KW2	56.94	100	0.569
dprA	Bacillus subtilis subsp. subtilis str. 168	42.4	88.968	0.377